RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CTLA4P16410 223 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 MYL9P24844 172 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR10A3P58181 314 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 NANOS3P60323 173 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPS11P62280 158 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZP4Q12836 540 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 MYBPHQ13203 477 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 FAM131AQ6UXB0 335 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 WDFY1Q8IWB7 410 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR8H2Q8N162 312 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 MINDY2Q8NBR6 621 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SNRNP27Q8WVK2 155 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 HSD17B8Q92506 261 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 KLHL15Q96M94 604 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SNX18Q96RF0 628 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZPBPQ9BS86 351 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 CCDC32Q9BV29 185 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 TRAPPC4Q9Y296 219 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 TTC28Q96AY4 2481 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 KMT2EQ8IZD2 1858 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 IGLV1-36A0A0B4J1U3 117 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A1W2PQ72 361 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 G3V3Y1 287 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZNF806P0C7X5 589 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 IFNGR1P15260 489 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 MLF1P58340 268 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 SNTA1Q13424 505 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 C5orf34Q96MH7 638 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 FRMD6Q96NE9 622 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 DDA1Q9BW61 102 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 SRRQ9GZT4 340 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 SERINC1Q9NRX5 453 aa15.58■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A087WV48 116 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FAM47E-STBD1D6RA91 191 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 PPP3R1P63098 170 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 IDNKQ5T6J7 187 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 CDCP2Q5VXM1 449 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 C3orf33Q6P1S2 294 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FAM220AQ7Z4H9 259 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM156Q8N614 296 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 YIPF7Q8N8F6 280 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 THEM6Q8WUY1 208 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 ASB10Q8WXI3 467 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 LIN37Q96GY3 246 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 PTGES2Q9H7Z7 377 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 ALKBH4Q9NXW9 302 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FOXJ2Q9P0K8 574 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 KCNG2Q9UJ96 466 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 IKZF2Q9UKS7 526 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FUOMA2VDF0 154 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FABP12A6NFH5 140 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 NPIPA5E9PKD4 350 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 UPK3AO75631 287 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 ABHD16AO95870 558 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 SERPINA3P01011 423 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 CD63P08962 238 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 ALOX5APP20292 161 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 MAP2K6P52564 334 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 POU3F1Q03052 451 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 Q0VFX4 171 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZNF468Q5VIY5 522 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 LIPNQ5VXI9 398 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 PLCZ1Q86YW0 608 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 RPS4Y2Q8TD47 263 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 OR14A2Q96R54 314 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 UBL7Q96S82 380 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 AMELYQ99218 206 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 SPRY4Q9C004 299 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 PROK2Q9HC23 129 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 TIGARQ9NQ88 270 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 MED29Q9NX70 200 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 NPIPA1Q9UND3 350 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FARSAQ9Y285 508 aaKnown RBP15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 FREM2Q5SZK8 3169 aa15.57■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A1W2PNR3 127 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 CD1AP06126 327 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 TACSTD2P09758 323 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 HSF1Q00613 529 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 LRRC69Q6ZNQ3 347 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 SLC35D2Q76EJ3 337 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 HTRA1Q92743 480 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 TXNDC15Q96J42 360 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM9BQ9NQ34 198 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 MRPL22Q9NWU5 206 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 HPF1Q9NWY4 346 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 SDK2Q58EX2 2172 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A0G2JK05 382 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZNF593O00488 134 aaPredicted RBP15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 KRT8P05787 483 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 RAB40ALP0C0E4 278 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 CFL1P23528 166 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 DAP3P51398 398 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 BAK1Q16611 211 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 HBMQ6B0K9 141 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 MZT2AQ6P582 158 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 TMEM81Q6P7N7 255 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 CNIH2Q6PI25 160 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 DHRS13Q6UX07 377 aa15.56■□□□□ 0.08
PCDHGC3-205ENST00000617641 KCTD20Q7Z5Y7 419 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms