RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 PRR30Q53SZ7 412 aaPredicted RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 EEF1A1P5Q5VTE0 462 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 GID4Q8IVV7 300 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 OR9Q1Q8NGQ5 310 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SGCDQ92629 289 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 RFKQ969G6 155 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 NMD3Q96D46 503 aaKnown RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SLC25A44Q96H78 314 aaPredicted RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 ADAD1Q96M93 576 aaKnown RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 PSORS1C1Q9UIG5 152 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 BLOC1S6Q9UL45 172 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 MAGEA13PA6NCF6 341 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 TRMUO75648 421 aaKnown RBP13.48□□□□□ -0.25
CBWD1-225ENST00000616944 TGM6O95932 706 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 GYPBP06028 91 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 HTR1AP08908 422 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 SPI1P17947 270 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 HTR1FP30939 366 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 CLDN17P56750 224 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 LY6DQ14210 128 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 HIST3H3Q16695 136 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 HDDC2Q7Z4H3 204 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 TMEM123Q8N131 208 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 TSSK2Q96PF2 358 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 RNF122Q9H9V4 155 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 BCO1Q9HAY6 547 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 RPRD1BQ9NQG5 326 aaKnown RBP13.48□□□□□ -0.25
CBWD1-225ENST00000616944 ASF1BQ9NVP2 202 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 MRPS18AQ9NVS2 196 aaKnown RBP13.48□□□□□ -0.25
CBWD1-225ENST00000616944 ASB6Q9NWX5 421 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBWD1-225ENST00000616944 RCE1Q9Y256 329 aa13.48□□□□□ -0.25
CBWD1-225ENST00000616944 NCOA6Q14686 2063 aaPredicted RBP13.48□□□□□ -0.25
CBWD1-225ENST00000616944 POLEQ07864 2286 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 SLC22A20A6NK97 555 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 AHCYL1O43865 530 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 FAM20BO75063 409 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 PIPP12273 146 aaPredicted RBP13.47□□□□□ -0.25
CBWD1-225ENST00000616944 APOFQ13790 326 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 LINC01590Q5TEZ4 76 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 MEPCEQ7L2J0 689 aaKnown RBP13.47□□□□□ -0.25
CBWD1-225ENST00000616944 CHMP1BQ7LBR1 199 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 OR6V1Q8N148 313 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 NOXO1Q8NFA2 376 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 GGHQ92820 318 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 TMEM45BQ96B21 275 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 WBP1Q96G27 269 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 OR2M2Q96R28 347 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 TEAD3Q99594 435 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
CBWD1-225ENST00000616944 TPRKBQ9Y3C4 175 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 RPL36Q9Y3U8 105 aaKnown RBP13.47□□□□□ -0.25
CBWD1-225ENST00000616944 COL6A6A6NMZ7 2263 aa13.47□□□□□ -0.25
CBWD1-225ENST00000616944 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 TRIM64CA6NLI5 447 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 SNTNA6NMZ2 147 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 AHRRA9YTQ3 701 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 RENP00797 406 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 IGHG1P01857 330 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 SMIM18P0DKX4 95 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 CTLA4P16410 223 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 PTGS2P35354 604 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 MTNR1AP48039 350 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 TMED1Q13445 227 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 CAMK2DQ13557 499 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
CBWD1-225ENST00000616944 ACSF3Q4G176 576 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-225ENST00000616944 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 AHSA2Q719I0 299 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF540Q8NDQ6 660 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 OR5M9Q8NGP3 310 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 OTULINQ96BN8 352 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 NUAK2Q9H093 628 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 OR51V1Q9H2C8 321 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 SCN3BQ9NY72 215 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 HAO2Q9NYQ3 351 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-225ENST00000616944 FKBP7Q9Y680 259 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 CHD6Q8TD26 2715 aa13.46□□□□□ -0.25
CBWD1-225ENST00000616944 NBASA2RRP1 2371 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 IGLV1-36A0A0B4J1U3 117 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 ZNF724A8MTY0 619 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 M0R3G1 203 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 ADRA2AP08913 450 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 FCGR2AP12318 317 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 SELENOPP49908 381 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 CDH15P55291 814 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 FMODQ06828 376 aa13.46□□□□□ -0.26
CBWD1-225ENST00000616944 GGTLC2Q14390 218 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms