RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 POM121CA8CG34 1229 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 KCNK2O95069 426 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 PRR35P0CG20 571 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 CCR6P51684 374 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 IHHQ14623 411 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 EIF2S3LQ2VIR3 472 aaKnown RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 NKAIN1Q4KMZ8 207 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 FAHD1Q6P587 224 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 Q6ZTK2 550 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 SMAP2Q8WU79 429 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 SPNS1Q9H2V7 528 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 ZNF385DQ9H6B1 395 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 ZNF286AQ9HBT8 521 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 CEACAM5P06731 702 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 S100A12P80511 92 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 GLYR1Q49A26 553 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 GPR55Q9Y2T6 319 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 UPK1AO00322 258 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 SURF4O15260 269 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 NUPL2O15504 423 aaKnown RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 DDAH2O95865 285 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 KCNAB1Q14722 419 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 SF3B4Q15427 424 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDH23-212ENST00000616684 CLVS2Q5SYC1 327 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 OR6M1Q8NGM8 313 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 PAQR8Q8TEZ7 354 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 CNRIP1Q96F85 164 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 SCN1AP35498 2009 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 PRKACBP22694 351 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 GABREP78334 506 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 ACTBL2Q562R1 376 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 H1FNTQ75WM6 255 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 DCXRQ7Z4W1 244 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 SAV1Q9H4B6 383 aaPredicted RBP17.13■□□□□ 0.33
CDH23-212ENST00000616684 LRFN1Q9P244 771 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 STEAP1Q9UHE8 339 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 OR52A1Q9UKL2 312 aa17.13■□□□□ 0.33
CDH23-212ENST00000616684 SLC22A23A1A5C7 686 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 EIF1BO60739 113 aaKnown RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 CD46P15529 392 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 ZNF93P35789 620 aaPredicted RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 MRPL19P49406 292 aaKnown RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 ERVK-16P61578 105 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 ALKAL2Q6UX46 152 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 GPR155Q7Z3F1 870 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 PADI1Q9ULC6 663 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 COPS3Q9UNS2 423 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 RPS18P62269 152 aaKnown RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 NPSR1Q6W5P4 371 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 HSD17B8Q92506 261 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 PSMF1Q92530 271 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 ACOXLQ9NUZ1 547 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 PRAMEF25A6NGN4 478 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 CCR9P51686 369 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 OPCMLQ14982 345 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 TRIM61Q5EBN2 209 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 CADM3Q8N126 398 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 DYNC2LI1Q8TCX1 351 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 STK35Q8TDR2 534 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 GCDHQ92947 438 aaPredicted RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 COA3Q9Y2R0 106 aaPredicted RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 RPL27P61353 136 aaKnown RBP17.12■□□□□ 0.33
CDH23-212ENST00000616684 TMEM196Q5HYL7 178 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 NTN4Q9HB63 628 aa17.12■□□□□ 0.33
CDH23-212ENST00000616684 M0R082 166 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 CRYZL1O95825 349 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 HIST1H1CP16403 213 aaKnown RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 TGFBR1P36897 503 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 ZNF684Q5T5D7 378 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 AADACL4Q5VUY2 407 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 GRAMD2AQ8IUY3 354 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 OR56B2PQ8NGI1 322 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 UTP23Q9BRU9 249 aaKnown RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 NDUFB11Q9NX14 153 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 GLTPQ9NZD2 209 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 PRICKLE3O43900 615 aaPredicted RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 SLC34A2O95436 690 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 NFYAP23511 347 aaPredicted RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 LUMP51884 338 aaPredicted RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 PRSS45Q7RTY3 260 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 DCLRE1CQ96SD1 692 aaKnown RBP17.11■□□□□ 0.33
CDH23-212ENST00000616684 TP53TG5Q9Y2B4 290 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 PLSCR5A0PG75 271 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 PRAMEF27A3QJZ7 478 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 IGHEP01854 428 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 PRAMEF9Q5VWM5 478 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 PLEKHA3Q9HB20 300 aa17.11■□□□□ 0.33
CDH23-212ENST00000616684 C1orf196B1AJZ1 125 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 PPM1DO15297 605 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 FBXO24O75426 580 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 ETV6P41212 452 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 RPL23AP62750 156 aaKnown RBP17.1■□□□□ 0.33
CDH23-212ENST00000616684 OXA1LQ15070 435 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 NKG7Q16617 165 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 AGBL4Q5VU57 503 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 DVL3Q92997 716 aaPredicted RBP17.1■□□□□ 0.33
CDH23-212ENST00000616684 MICU1Q9BPX6 476 aa17.1■□□□□ 0.33
CDH23-212ENST00000616684 RHNO1Q9BSD3 238 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms