RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PTHLHP12272 177 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 GALP22466 123 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 SFTPDP35247 375 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 FNTBP49356 437 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 SRP9P49458 86 aaKnown RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 VEGFCP49767 419 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 CBFBQ13951 182 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 YIF1BQ5BJH7 314 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 HACD4Q5VWC8 232 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR10K2Q6IF99 312 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 GALNTL5Q7Z4T8 443 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 JSRP1Q96MG2 331 aaPredicted RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 PRSS27Q9BQR3 290 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 NXF2Q9GZY0 626 aaKnown RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 MFFQ9GZY8 342 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 NPAP1Q9NZP6 1156 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 C19orf25Q9UFG5 118 aaPredicted RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 DOCK4Q8N1I0 1966 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 LOC102723971A0A1B0GUV8 181 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 FITM1A5D6W6 292 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 CELA2BP08218 269 aaPredicted RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 QDPRP09417 244 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF43P17038 809 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 RBMS1P29558 406 aaKnown RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 PEBP1P30086 187 aaKnown RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC6A1P30531 599 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 CAPZA1P52907 286 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 DYRK1AQ13627 763 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCNAB1Q14722 419 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 RAB11BQ15907 218 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 MENTQ9BUN1 341 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF471Q9BX82 626 aaPredicted RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 SELENOIQ9C0D9 397 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 KLK11Q9UBX7 282 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 RPH3AQ9Y2J0 694 aaPredicted RBP5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 HIF3AQ9Y2N7 669 aa5.15□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGHV3-20A0A0C4DH32 117 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF593O00488 134 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TNFSF14O43557 240 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 RAF1P04049 648 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ITGA5P08648 1049 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LINC00271P0C7V0 271 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 FASLGP48023 281 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF41P51814 821 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 C1QL3Q5VWW1 255 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM205Q6UW68 189 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 FAM46BQ96A09 425 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF578Q96N58 590 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LRFN5Q96NI6 719 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ORAI3Q9BRQ5 295 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 DNAJB12Q9NXW2 375 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SF3B6Q9Y3B4 125 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 FREM3P0C091 2139 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 DOPEY1Q5JWR5 2465 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MEIS3P1A6NDR6 274 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 C5orf51A6NDU8 294 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 METTL12A8MUP2 240 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF736B4DX44 427 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HRKO00198 91 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 AKR7A2O43488 359 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZIC2O95409 532 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MPIG6BO95866 241 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HEXBP07686 556 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PGAM2P15259 253 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ALKBH1Q13686 389 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SGCAQ16586 387 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PRICKLE4Q2TBC4 344 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PRTGQ2VWP7 1150 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 C14orf28Q4W4Y0 310 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 C1orf140Q5VVS0 124 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HEPHL1Q6MZM0 1159 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 CREB3L2Q70SY1 520 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ARMC10Q8N2F6 343 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LSMEM1Q8N8F7 131 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SYNPRQ8TBG9 265 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 UPRTQ96BW1 309 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MSANTD3Q96H12 275 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PRDM9Q9NQV7 894 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HAO2Q9NYQ3 351 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 RBBP6Q7Z6E9 1792 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMED7-TICAM2A0A0A6YYA0 188 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 AIPO00170 330 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 BHLHE40O14503 412 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 BCAT2O15382 392 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 EIF4E2O60573 245 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR7A10O76100 309 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 APOC3P02656 99 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ERCC1P07992 297 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HCKP08631 526 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LTBQ06643 244 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SRSF5Q13243 272 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZMYND11Q15326 602 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GRK1Q15835 563 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PLEKHN1Q494U1 663 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC35D3Q5M8T2 416 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 DMKNQ6E0U4 476 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM81Q6P7N7 255 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GRINAQ7Z429 371 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 BCORP1Q8N888 145 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 PNLDC1Q8NA58 520 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms