RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 TREM1Q9NP99 234 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 QPCTLQ9NXS2 382 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 SSTR2P30874 369 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 RPL35P42766 123 aaKnown RBP12.81□□□□□ -0.36
SSBP2-220ENST00000615665 SPOCK1Q08629 439 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 C17orf67Q0P5P2 114 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF141Q15928 474 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 PAPD4Q6PIY7 484 aaKnown RBP12.81□□□□□ -0.36
SSBP2-220ENST00000615665 SFTPA2Q8IWL1 248 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
SSBP2-220ENST00000615665 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 SIGLEC11Q96RL6 698 aa12.81□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
SSBP2-220ENST00000615665 TRAV1-2A0A0B4J238 106 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 IGHV3-20A0A0C4DH32 117 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 FRG2CA6NGY1 282 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 OR2AT4A6NND4 320 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 TMEM229AB2RXF0 380 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 E9PI62 339 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 EPXP11678 715 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 P2RX1P51575 399 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 RPL27P61353 136 aaKnown RBP12.8□□□□□ -0.36
SSBP2-220ENST00000615665 RDH10Q8IZV5 341 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ELP5Q8TE02 316 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ARL6Q9H0F7 186 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 TRAPPC6AO75865 159 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 PGAM2P15259 253 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 POU4F3Q15319 338 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 C17orf47Q8NEP4 570 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 THAP6Q8TBB0 222 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 PELI1Q96FA3 418 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 OR6C1Q96RD1 312 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 PTTG3PQ9NZH4 202 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 TMEM221A6NGB7 291 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF878C9JN71 531 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 C1QBP02746 253 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 LINC00271P0C7V0 271 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 CCR9P51686 369 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ACSM1Q08AH1 577 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 SGCBQ16585 318 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 PPP1R3BQ86XI6 285 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 OR6F1Q8NGZ6 308 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 NEK7Q8TDX7 302 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ANAPC1Q9H1A4 1944 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 IGHV5-51A0A0C4DH38 117 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 MSL3P1P0C860 447 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 RPS27P42677 84 aaKnown RBP12.8□□□□□ -0.36
SSBP2-220ENST00000615665 SRSF5Q13243 272 aaKnown RBP12.8□□□□□ -0.36
SSBP2-220ENST00000615665 IL10RAQ13651 578 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF79Q15937 498 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF74Q16587 644 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 APOBEC4Q8WW27 367 aaKnown RBP12.8□□□□□ -0.36
SSBP2-220ENST00000615665 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 VSTM2LQ96N03 204 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 NUDT22Q9BRQ3 303 aa12.8□□□□□ -0.36
SSBP2-220ENST00000615665 IFITM5A6NNB3 132 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 AIPO00170 330 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ARPC3O15145 178 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SULT1B1O43704 296 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 MCEMP1Q8IX19 187 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 OR51D1Q8NGF3 324 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ORAI1Q96D31 301 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 WDR77Q9BQA1 342 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 FOXQ1Q9C009 403 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 METTL17Q9H7H0 456 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 CSTBP04080 98 aaKnown RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 VEGFCP49767 419 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SNTA1Q13424 505 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SMAD4Q13485 552 aaKnown RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ACKR1Q16570 336 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SCARF2Q96GP6 870 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ZC3H10Q96K80 434 aaKnown RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 URM1Q9BTM9 101 aaKnown RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 AICDAQ9GZX7 198 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 RPH3AQ9Y2J0 694 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-220ENST00000615665 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 H7C2Y5 167 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 SEC16AO15027 2179 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ALDOBP05062 364 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF84P51523 738 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 GRAMD2AQ8IUY3 354 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 KDM8Q8N371 416 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ABI3Q9P2A4 366 aa12.79□□□□□ -0.36
SSBP2-220ENST00000615665 ANKRD61A6NGH8 418 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms