RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ZNF346Q9UL40 294 aaKnown RBP19.94■□□□□ 0.78
MMP28-203ENST00000612672 TPST2O60704 377 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 PRSS23O95084 383 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 SERPINA5P05154 406 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 HKR1P10072 659 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 RBMXP38159 391 aaKnown RBP19.93■□□□□ 0.78
MMP28-203ENST00000612672 DEFA6Q01524 100 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 DCAF12L2Q5VW00 463 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 C5orf46Q6UWT4 87 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 NET1Q7Z628 596 aaPredicted RBP19.93■□□□□ 0.78
MMP28-203ENST00000612672 MIER2Q8N344 545 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 BPIFB2Q8N4F0 458 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 TAF15Q92804 592 aaKnown RBP eCLIP19.93■□□□□ 0.78
MMP28-203ENST00000612672 C1orf147Q96MC9 270 aaPredicted RBP19.93■□□□□ 0.78
MMP28-203ENST00000612672 DUX5Q96PT3 197 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 ZBTB18Q99592 522 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 A4GALTQ9NPC4 353 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 B3GAT2Q9NPZ5 323 aa19.93■□□□□ 0.78
MMP28-203ENST00000612672 PLPP3O14495 311 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 ANP32DO95626 131 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 ZNF250P15622 560 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 CRYBB2P43320 205 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 GLO1Q04760 184 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 PUDPQ08623 228 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 RGNQ15493 299 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 PDCD4Q53EL6 469 aaKnown RBP19.92■□□□□ 0.78
MMP28-203ENST00000612672 SCAIQ8N9R8 606 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 GLB1L3Q8NCI6 653 aaPredicted RBP19.92■□□□□ 0.78
MMP28-203ENST00000612672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.92■□□□□ 0.78
MMP28-203ENST00000612672 ZBTB9Q96C00 473 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 SH3GL3Q99963 347 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 PAIP1Q9H074 479 aaKnown RBP19.92■□□□□ 0.78
MMP28-203ENST00000612672 DENND2DQ9H6A0 471 aaPredicted RBP19.92■□□□□ 0.78
MMP28-203ENST00000612672 ARMC7Q9H6L4 198 aa19.92■□□□□ 0.78
MMP28-203ENST00000612672 IGHV1-69-2A0A0G2JMI3 117 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 J3QLI3 93 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 IL6P05231 212 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 BMP2P12643 396 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 CSNK1A1P48729 337 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 KLF3P57682 345 aaPredicted RBP19.91■□□□□ 0.78
MMP28-203ENST00000612672 STX3Q13277 289 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 USP51Q70EK9 711 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 SLC22A24Q8N4F4 322 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 SIGLECL1Q8N7X8 197 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 SLC30A7Q8NEW0 376 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 OR6S1Q8NH40 331 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 BBS10Q8TAM1 723 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 NANPQ8TBE9 248 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 TMEM54Q969K7 222 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 RAB39BQ96DA2 213 aa19.91■□□□□ 0.78
MMP28-203ENST00000612672 MRPL39Q9NYK5 338 aaKnown RBP19.91■□□□□ 0.78
MMP28-203ENST00000612672 A0A0B4J2E0 115 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 A0A1B0GX12 115 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 SLC22A3O75751 556 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 BCL10O95999 233 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 ANPEPP15144 967 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 MAKP20794 623 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 PRKAR1BP31321 381 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 BIDP55957 195 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 PMS2P3Q13401 168 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 TSTQ16762 297 aaKnown RBP19.9■□□□□ 0.78
MMP28-203ENST00000612672 TMEM154Q6P9G4 183 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 SHISA2Q6UWI4 295 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 TEX29Q8N6K0 151 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 SYNPRQ8TBG9 265 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 AENQ8WTP8 325 aaKnown RBP19.9■□□□□ 0.78
MMP28-203ENST00000612672 DNAJA4Q8WW22 397 aaPredicted RBP19.9■□□□□ 0.78
MMP28-203ENST00000612672 LRRC58Q96CX6 371 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 C7orf69Q9H7B7 122 aa19.9■□□□□ 0.78
MMP28-203ENST00000612672 CACYBPQ9HB71 228 aaKnown RBP19.9■□□□□ 0.78
MMP28-203ENST00000612672 ZNF726A6NNF4 738 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 C11orf98E9PRG8 122 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 LCN2P80188 198 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 SPRNQ5BIV9 151 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 C6orf10Q5SRN2 563 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 FAM91A1Q658Y4 838 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 ULK3Q6PHR2 472 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 LRFN4Q6PJG9 635 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 MAVSQ7Z434 540 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 MSRB3Q8IXL7 192 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 NFKBIDQ8NI38 313 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 GTF2H4Q92759 462 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 ITCHQ96J02 903 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 TMEM109Q9BVC6 243 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 ASPNQ9BXN1 380 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 TCF7L2Q9NQB0 619 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 TMEM38BQ9NVV0 291 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 NKIRAS2Q9NYR9 191 aa19.89■□□□□ 0.77
MMP28-203ENST00000612672 LCKP06239 509 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 AHCYP23526 432 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 ZFP36P26651 326 aaKnown RBP19.88■□□□□ 0.77
MMP28-203ENST00000612672 RBBP4Q09028 425 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 MELKQ14680 651 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 OR1Q1Q15612 314 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 PCGF3Q3KNV8 242 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 DHRS4L2Q6PKH6 230 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 SLC2A7Q6PXP3 512 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 PIWIL3Q7Z3Z3 882 aaKnown RBP19.88■□□□□ 0.77
MMP28-203ENST00000612672 PXKQ7Z7A4 578 aa19.88■□□□□ 0.77
MMP28-203ENST00000612672 SLC47A1Q96FL8 570 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms