RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ACADSP16219 412 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GSTM3P21266 225 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 FASP25445 335 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 HOXC12P31275 282 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GSSP48637 474 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 CLRN1P58418 232 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 RAP1BP61224 184 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
CTSA-211ENST00000606066 RAP1AP62834 184 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 PPP1R8Q12972 351 aaKnown RBP12.55□□□□□ -0.4
CTSA-211ENST00000606066 FHL1Q13642 323 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 DAZAP2Q15038 168 aaPredicted RBP12.55□□□□□ -0.4
CTSA-211ENST00000606066 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 STK11Q15831 433 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 RPL13AP3Q6NVV1 102 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 AQP11Q8NBQ7 271 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 OR10G2Q8NGC3 310 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 OR9Q2Q8NGE9 314 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 FNDC8Q8TC99 324 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GIPC3Q8TF64 312 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 ASB10Q8WXI3 467 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GPA33Q99795 319 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
CTSA-211ENST00000606066 ULBP2Q9BZM5 246 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GLTPQ9NZD2 209 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 GRHPRQ9UBQ7 328 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 ZNF346Q9UL40 294 aaKnown RBP12.55□□□□□ -0.4
CTSA-211ENST00000606066 MGAT4BQ9UQ53 548 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 ARRDC5A6NEK1 342 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 TIPRLO75663 272 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 GASTP01350 101 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 PGA4P0DJD7 388 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 PGA3P0DJD8 388 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 CDH2P19022 906 aaPredicted RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 PAX7P23759 505 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 SLC6A6P31641 620 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 ACVR1BP36896 505 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 RPS6KA3P51812 740 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 KPNB1Q14974 876 aaKnown RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 GABRA6Q16445 453 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 RFX4Q33E94 735 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 GPR139Q6DWJ6 353 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 ZNF770Q6IQ21 691 aaPredicted RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 IGFN1Q86VF2 1251 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 NRBF2Q96F24 287 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 ZC3HAV1LQ96H79 300 aaKnown RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 BOD1Q96IK1 185 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 GPX7Q96SL4 187 aaPredicted RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 PDP1Q9P0J1 537 aaPredicted RBP12.54□□□□□ -0.4
CTSA-211ENST00000606066 ITGB1BP2Q9UKP3 347 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
CTSA-211ENST00000606066 ZNF99A8MXY4 864 aaPredicted RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 XKRYO14609 159 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ENTPD5O75356 428 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 APEHP13798 732 aaKnown RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 CRYGSP22914 178 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 ERVK-25P63136 954 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 COX10Q12887 443 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 PPA1Q15181 289 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 TAB1Q15750 504 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ARIH2OSQ8N7S6 290 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 TSPAN32Q96QS1 320 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 RBP7Q96R05 134 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ALG12Q9BV10 488 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
CTSA-211ENST00000606066 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
CTSA-211ENST00000606066 NRIP3Q9NQ35 241 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms