RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 UPB1Q9UBR1 384 aa11.34□□□□□ -0.59
CDCA3-212ENST00000604599 CHRNA9Q9UGM1 479 aa11.34□□□□□ -0.59
CDCA3-212ENST00000604599 DPP7Q9UHL4 492 aa11.34□□□□□ -0.59
CDCA3-212ENST00000604599 RPH3AQ9Y2J0 694 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-212ENST00000604599 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 C5orf52A6NGY3 159 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 C4orf47A7E2U8 309 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 SPINT1O43278 529 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 FGF16O43320 207 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 NID1P14543 1247 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 POU3F4P49335 361 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 DIO1P49895 249 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 RAB33AQ14088 237 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 GGTLC2Q14390 218 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 GAS6Q14393 721 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ARHGAP19Q14CB8 494 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 NRSN1Q8IZ57 195 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF511Q8NB15 262 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM106AQ96A25 262 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 C14orf79Q96F83 325 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ARL5BQ96KC2 179 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 LINC00615Q96LM1 132 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-212ENST00000604599 POTEKPQ9BYX7 375 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ULBP3Q9BZM4 244 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 PCBD2Q9H0N5 130 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-212ENST00000604599 PCOLCE2Q9UKZ9 415 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-212ENST00000604599 SCN5AQ14524 2016 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 C1orf196B1AJZ1 125 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 WNT11O96014 354 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 HEXAP06865 529 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 PGAM2P15259 253 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 SPI1P17947 270 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ABCD3P28288 659 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 AQP2P41181 271 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 TCTN1Q2MV58 587 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 RASD2Q96D21 266 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF514Q96K75 400 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-212ENST00000604599 HRH4Q9H3N8 390 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 ACKR4Q9NPB9 350 aa11.33□□□□□ -0.6
CDCA3-212ENST00000604599 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 A0A0B4J2A0 478 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 EFCAB7A8K855 629 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 UBE2CO00762 179 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 THBS1P07996 1170 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 C6P13671 934 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF44P15621 663 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SDHAP31040 664 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NTHL1P78549 312 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ID2Q02363 134 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 PLAURQ03405 335 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 PRDX1Q06830 199 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 RHOUQ7L0Q8 258 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF619Q8N2I2 560 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 OR2L5Q8NG80 312 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ZBTB8AQ96BR9 441 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 IGSF21Q96ID5 467 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SPSB2Q99619 263 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NRIP2Q9BQI9 281 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ZMAT3Q9HA38 289 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 CAPN10Q9HC96 672 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 FRRS1LQ9P0K9 344 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SHPKQ9UHJ6 478 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SERTAD3Q9UJW9 196 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 EEF1E1-BLOC1S5C9J1V9 151 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 HTR3BO95264 441 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 DBIP07108 87 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 DCNP07585 359 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 S100PP25815 95 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 AVPR2P30518 371 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 BTN3A2P78410 334 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SLC7A9P82251 487 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 AIMP2Q13155 320 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 IRF4Q15306 451 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TGIF1Q15583 401 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NKPD1Q17RQ9 610 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TRMT12Q53H54 448 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 DCST2Q5T1A1 773 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SLC29A4Q7RTT9 530 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM200AQ86VY9 491 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NUBPLQ8TB37 319 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TSSK2Q96PF2 358 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms