RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 WASF3Q9UPY6 502 aa11□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DMXL1Q9Y485 3027 aa11□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PINLYPA6NC86 204 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 G3V3Y1 287 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TLX3O43711 291 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ATE1O95260 518 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ACTL6AO96019 429 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 IGHG1P01857 330 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GYPBP06028 91 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RFPL3SP0C7P2 107 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 IFNGR1P15260 489 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF43P17038 809 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SHC1P29353 583 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GABRA5P31644 462 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SFTPDP35247 375 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF133P52736 654 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF85Q03923 595 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 LSAMPQ13449 338 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SSX1Q16384 188 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TEX30Q5JUR7 227 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ATP1A1-AS1Q5TC04 95 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TMEM225Q6GV28 225 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CD200R1LQ6Q8B3 271 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 IGFL3Q6UXB1 125 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GGNQ86UU5 652 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CDC20BQ86Y33 519 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR6V1Q8N148 313 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 FAM109AQ8N4B1 249 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF454Q8N9F8 522 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ATP6V1C2Q8NEY4 427 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 NOXO1Q8NFA2 376 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR10H4Q8NGA5 316 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR6K6Q8NGW6 343 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ASB17Q8WXJ9 295 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 INTS12Q96CB8 462 aaKnown RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZMYND19Q96E35 227 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DACH2Q96NX9 599 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TIMP4Q99727 224 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 NAA50Q9GZZ1 169 aaKnown RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 BABAM2Q9NXR7 383 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KLHL9Q9P2J3 617 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KCNG2Q9UJ96 466 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 B9D1Q9UPM9 204 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RCE1Q9Y256 329 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MSRB2Q9Y3D2 182 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PCDHGA9Q9Y5G4 932 aaKnown RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KCNMB2Q9Y691 235 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 A3GALT2U3KPV4 340 aa10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PTPRZ1P23471 2315 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 A0A0J9YW62 118 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 A0A1W2PNR3 127 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 A0A1W2PQL4 384 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF670-ZNF695F2Z2N8 137 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DLL1O00548 723 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KHDRBS3O75525 346 aaKnown RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SULT1C4O75897 302 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TFP02787 698 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 HSMCR30P0CW71 290 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PGA4P0DJD7 388 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PGA3P0DJD8 388 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PRKAR1AP10644 381 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 POU3F2P20265 443 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GADD45AP24522 165 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 FGF9P31371 208 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PTGS2P35354 604 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MEOX1P50221 254 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GPR85P60893 370 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 FOXK1P85037 733 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 EGR3Q06889 387 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TOMM20Q15388 145 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 HIST3H3Q16695 136 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PCK2Q16822 640 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF766Q5HY98 468 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR2G6Q5TZ20 316 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ABLIM2Q6H8Q1 611 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PLEKHG7Q6ZR37 379 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 VASH1Q7L8A9 365 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SHFQ7M4L6 423 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GALNTL5Q7Z4T8 443 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 LHFPL3Q86UP9 236 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PM20D2Q8IYS1 436 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR5M1Q8NGP8 315 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR2V1Q8NHB1 315 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PNPLA2Q96AD5 504 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RBP7Q96R05 134 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 INTS14Q96SY0 518 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 NUAK2Q9H093 628 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CXorf56Q9H5V9 222 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TMEM185BQ9H7F4 350 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 WDR76Q9H967 626 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KLK13Q9UKR3 277 aa10.98□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 EFSO43281 561 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PLPP2O43688 288 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SERPINI2O75830 405 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TRAPPC6AO75865 159 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms