RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ACOT7O00154 380 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 TXNDC12O95881 172 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 IGF2P01344 180 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 PROS1P07225 676 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 ALOX5APP20292 161 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 ITPKBP27987 946 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 GABRA4P48169 554 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 CBFBQ13951 182 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 KCNAB1Q14722 419 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 OLFML2AQ68BL7 652 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 GLDNQ6ZMI3 551 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 Q6ZS52 159 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 CDH24Q86UP0 819 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 GLB1L2Q8IW92 636 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 PRSS35Q8N3Z0 413 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 NSMAFQ92636 917 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 FOXN4Q96NZ1 517 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 RBP7Q96R05 134 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 MGAT4CQ9UBM8 478 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 IGHV5-51A0A0C4DH38 117 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 RPS10-NUDT3A0A1W2PQS6 291 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 CCR5P51681 352 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 TSPAN5P62079 268 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 C1QL3Q5VWW1 255 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 PM20D2Q8IYS1 436 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 FAM160A2Q8N612 972 aaPredicted RBP18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 KLHDC7BQ96G42 594 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 TGM7Q96PF1 710 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 MRI1Q9BV20 369 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 GLTPQ9NZD2 209 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 ETV7Q9Y603 341 aa18.33■□□□□ 0.53
SHKBP1-225ENST00000600733 CDC14CA4D256 554 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 WISP1O95388 367 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 ALDOBP05062 364 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 MRPS10P82664 201 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 DMWDQ09019 674 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 CCINQ13939 588 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 SERTAD2Q14140 314 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 TCTE1Q5JU00 501 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 MAMSTRQ6ZN01 415 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 ATOH1Q92858 354 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 WDR89Q96FK6 387 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF285Q96NJ3 590 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 NRSN2Q9GZP1 204 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 EXOSC3Q9NQT5 275 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 KCNG2Q9UJ96 466 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 PPIEQ9UNP9 301 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 PLCL2Q9UPR0 1127 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 AUP1Q9Y679 476 aa18.33■□□□□ 0.52
SHKBP1-225ENST00000600733 CIB4A0PJX0 185 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 ICOSLGO75144 302 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 TMEM127O75204 238 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 IFNA7P01567 189 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 NUDT1P36639 197 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 PPICP45877 212 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 BLKP51451 505 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 TOMM34Q15785 309 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 SIGIRRQ6IA17 410 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 SUN5Q8TC36 379 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 RLN3Q8WXF3 142 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 TSLPQ969D9 159 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 RELTQ969Z4 430 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 KLHL15Q96M94 604 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 GAL3ST4Q96RP7 486 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 PIPOXQ9P0Z9 390 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 NUP210LQ5VU65 1888 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 ZSCAN5BA6NJL1 495 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 C11orf98E9PRG8 122 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF254O75437 659 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 GLSO94925 669 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 HIST1H2ABP04908 130 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 OR1D4P47884 311 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 ZNF117Q03924 483 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 GRK1Q15835 563 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 EEF1A1P5Q5VTE0 462 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 HIST3H2AQ7L7L0 130 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 MEIOBQ8N635 442 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 HIST1H2ACQ93077 130 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 LCORQ96JN0 433 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 INTS14Q96SY0 518 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 COMMD4Q9H0A8 199 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 LANCL2Q9NS86 450 aa18.32■□□□□ 0.52
SHKBP1-225ENST00000600733 PCNX3Q9H6A9 2034 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 RP1P56715 2156 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 TRBV5-7A0A0A0MS05 114 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 SHISA7A6NL88 538 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 HCRTR2O43614 444 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 RENP00797 406 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 HRGP04196 525 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 EFNB2P52799 333 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 LBX1P52954 281 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 IKZF1Q13422 519 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 EMC4Q5J8M3 183 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 LRRN1Q6UXK5 716 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
SHKBP1-225ENST00000600733 KCNK15Q9H427 330 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms