RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TEX47Q8TBZ9 253 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 CA5BP1Q8WTZ4 195 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 TMEM54Q969K7 222 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC25A44Q96H78 314 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 MRPL13Q9BYD1 178 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 GRHPRQ9UBQ7 328 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 FOXD3Q9UJU5 478 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 H7C1C5 153 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 SDHAP31040 664 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 LCN6P62502 163 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 KRR1Q13601 381 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 GINS1Q14691 196 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 PGGHGQ32M88 737 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC35F1Q5T1Q4 408 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 OGFRL1Q5TC84 451 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 TMEM236Q5W0B7 351 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 FBXW9Q5XUX1 488 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 GPR139Q6DWJ6 353 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 ACSM5Q6NUN0 579 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 NOXO1Q8NFA2 376 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 NRG4Q8WWG1 115 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF566Q969W8 418 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 ALKBH3Q96Q83 286 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 LINC00470Q9BZP3 86 aa17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 FLNBO75369 2602 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-222ENST00000600320 ASH1LQ9NR48 2969 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 M0R3G1 203 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 ARHGEF9O43307 516 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 CLDN14O95500 239 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 IGHG1P01857 330 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 HIST1H1CP16403 213 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 CDKN2AP42771 156 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 CSNK1A1P48729 337 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 ASCL1P50553 236 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 CDK5Q00535 292 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 FAPQ12884 760 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 ZIK1Q3SY52 487 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 GABRG1Q8N1C3 465 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 UBE2J2Q8N2K1 259 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 LNX2Q8N448 690 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 POMGNT2Q8NAT1 580 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 SYT14Q8NB59 555 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 OR2T33Q8NG76 320 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 OR6N1Q8NGY5 312 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 OR4K13Q8NH42 304 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 SSC4DQ8WTU2 575 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 NMD3Q96D46 503 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 KCNK17Q96T54 332 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 GABARAPL3Q9BY60 117 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 RIBC2Q9H4K1 309 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC25A19Q9HC21 320 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 UPB1Q9UBR1 384 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 MALT1Q9UDY8 824 aa17.65■□□□□ 0.42
SHKBP1-222ENST00000600320 SETXQ7Z333 2677 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 IGKV1D-43A0A0B4J1Z2 117 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 A6NIZ1 184 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 IGHV1-2P23083 117 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 GIPRP48546 466 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 RAP1BP61224 184 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 ESRRGP62508 458 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 RAP1AP62834 184 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 MYBPC1Q00872 1141 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 DBPQ10586 325 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 FBXL19-AS1Q494R0 122 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 ZNF362Q5T0B9 420 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 FAM205BPQ63HN1 556 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 HDDC2Q7Z4H3 204 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 GPR137CQ8N3F9 429 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 GALNT4Q8N4A0 578 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 ZNF837Q96EG3 531 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 LRR1Q96L50 414 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 RBM24Q9BX46 236 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 GALNT8Q9NY28 637 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 GLTPQ9NZD2 209 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 BAIAP2Q9UQB8 552 aa17.64■□□□□ 0.41
SHKBP1-222ENST00000600320 MYO18BQ8IUG5 2567 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 DLGAP1O14490 977 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 IDH3BO43837 385 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 SLC2A10O95528 541 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 CNOT4O95628 575 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 ITGA5P08648 1049 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 GRNP28799 593 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 GRK5P34947 590 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 CLRN1P58418 232 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 ROR2Q01974 943 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 FMODQ06828 376 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 TFF3Q07654 80 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 FAM27E3Q08E93 113 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 NPRL3Q12980 569 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 PTGES3Q15185 160 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 TSC22D1Q15714 1073 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 HIST3H3Q16695 136 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 C9orf135Q5VTT2 229 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 SLC27A4Q6P1M0 643 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 LRFN4Q6PJG9 635 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 Q6ZT83 130 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 BEND4Q6ZU67 534 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 OR52E2Q8NGJ4 325 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 MBOAT4Q96T53 435 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms