RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C12orf49	Q9H741	205 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	PROCR	Q9UNN8	238 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	ADAM18	Q9Y3Q7	739 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	GMPPB	Q9Y5P6	360 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	FLVCR1	Q9Y5Y0	555 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	HCFC1	P51610	2035 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF726	A6NNF4	738 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	EEF1E1-BLOC1S5	C9J1V9	151 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026		H0YAE9	185 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	SLC16A6	O15403	523 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	EEF1E1	O43324	174 aa	Known RBP	19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	CGA	P01215	116 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	SDHA	P31040	664 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	CAPG	P40121	348 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	CLDN17	P56750	224 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	CDC42	P60953	191 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	ACSM5	Q6NUN0	579 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	PLEKHA8	Q96JA3	519 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	HRASLS5	Q96KN8	279 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	ADAD1	Q96M93	576 aa	Known RBP	19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	TSPAN32	Q96QS1	320 aa		19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZNF184	Q99676	751 aa	Predicted RBP	19.45	■□□□□ 0.7
LTBP4-227	ENST00000600026		A6NIZ1	184 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	XKRY	O14609	159 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	SMNDC1	O75940	238 aa	Known RBP eCLIP	19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	TXNDC12	O95881	172 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	IFNG	P01579	166 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	CD8B	P10966	210 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	GGT2	P36268	569 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	ACVR1B	P36896	505 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	ASCL1	P50553	236 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	BID	P55957	195 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	RAP1B	P61224	184 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	RAP1A	P62834	184 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	ADARB1	P78563	741 aa	Known RBP	19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	KEAP1	Q14145	624 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	MELK	Q14680	651 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	FAM122B	Q7Z309	247 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	ARIH2OS	Q8N7S6	290 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	ASB10	Q8WXI3	467 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026		Q96M85	177 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	PITX2	Q99697	317 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	OPN3	Q9H1Y3	402 aa	Predicted RBP	19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	KCNJ16	Q9NPI9	418 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	PARPBP	Q9NWS1	579 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	MED29	Q9NX70	200 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	JKAMP	Q9P055	326 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	KLHL21	Q9UJP4	597 aa		19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	NOSIP	Q9Y314	301 aa	Known RBP	19.44	■□□□□ 0.7
LTBP4-227	ENST00000600026	TEX13C	A0A0J9YWL9	993 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	KRR1	Q13601	381 aa	Known RBP	19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	SNAPC1	Q16533	368 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	SLC35F1	Q5T1Q4	408 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	C12orf73	Q69YU5	71 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	NHLRC1	Q6VVB1	395 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	LUZP2	Q86TE4	346 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	JAZF1	Q86VZ6	243 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	DEPDC4	Q8N2C3	294 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	TMEM45B	Q96B21	275 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	RASD2	Q96D21	266 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	TXNDC15	Q96J42	360 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZNF385A	Q96PM9	386 aa	Known RBP	19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	APOL4	Q9BPW4	351 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	PLSCR4	Q9NRQ2	329 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	TVP23B	Q9NYZ1	205 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	NDRG4	Q9ULP0	352 aa	Known RBP	19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	RAB26	Q9ULW5	256 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	RCE1	Q9Y256	329 aa		19.43	■□□□□ 0.7
LTBP4-227	ENST00000600026	DOPEY1	Q5JWR5	2465 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	FREM1	Q5H8C1	2179 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	SLC35F4	A4IF30	521 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	RIIAD1	A6NNX1	92 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026		E9PQ18	207 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	MSTN	O14793	375 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	MRPL33	O75394	65 aa	Known RBP	19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	EDNRA	P25101	427 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	IL18R1	Q13478	541 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	ARMC4	Q5T2S8	1044 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	C6orf52	Q5T4I8	152 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	TFAP2E	Q6VUC0	442 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	AAED1	Q7RTV5	226 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	ADCK1	Q86TW2	530 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZIC4	Q8N9L1	334 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZNF610	Q8N9Z0	462 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	SETD9	Q8NE22	299 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	OR6X1	Q8NH79	312 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZNF519	Q8TB69	540 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	FAM81A	Q8TBF8	368 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	TFAP2C	Q92754	450 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	EMC6	Q9BV81	110 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	CMC2	Q9NRP2	79 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026	IMPAD1	Q9NX62	359 aa		19.42	■□□□□ 0.7
LTBP4-227	ENST00000600026		A1L4Q6	167 aa		19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	ARHGEF9	O43307	516 aa		19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	CLDN1	O95832	211 aa		19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	ACADS	P16219	412 aa		19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	HIST1H1C	P16403	213 aa	Known RBP	19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	ZNF3	P17036	446 aa		19.41	■□□□□ 0.7
LTBP4-227	ENST00000600026	NTF4	P34130	210 aa		19.41	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms