RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SEC61A2Q9H9S3 476 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 MYOZ1Q9NP98 299 aaPredicted RBP16.26■□□□□ 0.19
PNKP-213ENST00000599543 BAG5Q9UL15 447 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 CORINQ9Y5Q5 1042 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 A0A087WUJ7 227 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 A0A0B4J2E0 115 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 LOC102725191A0A1B0GVB3 256 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 A0A1B0GX12 115 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 RNF212BA8MTL3 300 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 ZNF99A8MXY4 864 aaPredicted RBP16.25■□□□□ 0.19
PNKP-213ENST00000599543 M0R3G1 203 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 TRAF3IP2O43734 574 aaPredicted RBP16.25■□□□□ 0.19
PNKP-213ENST00000599543 LYPD3O95274 346 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 IFNA14P01570 189 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 CELA3BP08861 270 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 FAM157CP0CG43 387 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 IGHV4-31P0DP07 118 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 CBR1P16152 277 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 FUT4P22083 530 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 ARR3P36575 388 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 PPOXP50336 477 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 IDH3GP51553 393 aaPredicted RBP16.25■□□□□ 0.19
PNKP-213ENST00000599543 LSM11P83369 360 aaKnown RBP eCLIP16.25■□□□□ 0.19
PNKP-213ENST00000599543 EFNB3Q15768 340 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 CARD17Q5XLA6 110 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 GLYATQ6IB77 296 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 WDR88Q6ZMY6 472 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 TMEM123Q8N131 208 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 FAM86B1Q8N7N1 296 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 NUP37Q8NFH4 326 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 ADAMTS16Q8TE57 1224 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 RASSF5Q8WWW0 418 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 ZNF837Q96EG3 531 aaPredicted RBP16.25■□□□□ 0.19
PNKP-213ENST00000599543 BEX2Q9BXY8 128 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 PLK3Q9H4B4 646 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 TMEM160Q9NX00 188 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 CD300AQ9UGN4 299 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 FBXO9Q9UK97 447 aaPredicted RBP16.25■□□□□ 0.19
PNKP-213ENST00000599543 SLC7A7Q9UM01 511 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 SNX13Q9Y5W8 968 aa16.25■□□□□ 0.19
PNKP-213ENST00000599543 LOC390937A0A1W2PQ73 354 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 VSTM5A8MXK1 200 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 VWC2LB2RUY7 222 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 SEC14L2O76054 403 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 CALB2P22676 271 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 NR4A2P43354 598 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 GZMKP49863 264 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 SELENOWP63302 87 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 POU3F1Q03052 451 aaPredicted RBP16.24■□□□□ 0.19
PNKP-213ENST00000599543 SAMD4BQ5PRF9 694 aaKnown RBP16.24■□□□□ 0.19
PNKP-213ENST00000599543 MYPOPQ86VE0 399 aaPredicted RBP16.24■□□□□ 0.19
PNKP-213ENST00000599543 CCDC36Q8IYA8 594 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 C10orf53Q8N6V4 93 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 SCAIQ8N9R8 606 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 OR6S1Q8NH40 331 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 SLC41A3Q96GZ6 507 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 HSH2DQ96JZ2 352 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 REPIN1Q9BWE0 567 aaKnown RBP16.24■□□□□ 0.19
PNKP-213ENST00000599543 ZNF442Q9H7R0 627 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 EVA1AQ9H8M9 152 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 LPAR3Q9UBY5 353 aa16.24■□□□□ 0.19
PNKP-213ENST00000599543 IGHV2OR16-5A0A0B4J2B6 119 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 LRRN3E7EW58 273 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 J3KTA2 159 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 KPNA4O00629 521 aaPredicted RBP16.23■□□□□ 0.19
PNKP-213ENST00000599543 HPRP00739 348 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 ERCC1P07992 297 aaPredicted RBP16.23■□□□□ 0.19
PNKP-213ENST00000599543 MNAT1P51948 309 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 PUDPQ08623 228 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 PMS2P3Q13401 168 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 PIN1Q13526 163 aaPredicted RBP16.23■□□□□ 0.19
PNKP-213ENST00000599543 SWT1Q5T5J6 900 aaKnown RBP16.23■□□□□ 0.19
PNKP-213ENST00000599543 FKBP9P1Q75LS8 142 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 CBLL1Q75N03 491 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 MDP1Q86V88 176 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 EMC6Q9BV81 110 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 SHARPINQ9H0F6 387 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 RAB1BQ9H0U4 201 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 B3GAT2Q9NPZ5 323 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 RHCGQ9UBD6 479 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 NOX1Q9Y5S8 564 aa16.23■□□□□ 0.19
PNKP-213ENST00000599543 TRAPPC13A5PLN9 417 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 ZNF503-AS2A6NEH8 195 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 MS4A18H0YCH9 400 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 hCG_2039718K7EN88 272 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 ARPC2O15144 300 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 FMO6PO60774 539 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 BGLAPP02818 100 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 HLA-DOBP13765 273 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 APEHP13798 732 aaKnown RBP16.22■□□□□ 0.19
PNKP-213ENST00000599543 HSD17B1P14061 328 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 NPR2P20594 1047 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 THBS4P35443 961 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 TAS2R41P59536 307 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 HGFACQ04756 655 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 MS4A18Q3C1V0 323 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 IQCCQ4KMZ1 466 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 ZNF613Q6PF04 617 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 C20orf196Q8IYI0 205 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms