RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ITGA2P17301 1181 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 YAP1P46937 504 aaKnown RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 IDH3GP51553 393 aaPredicted RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 GYS2P54840 703 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 UGT2B15P54855 530 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 TUBA1BP68363 451 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 TUBA4AP68366 448 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 SLC25A3Q00325 362 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 GSG1Q2KHT4 349 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 SAMD4BQ5PRF9 694 aaKnown RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 GKAP1Q5VSY0 366 aaPredicted RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 TUBA1AQ71U36 451 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 VTCN1Q7Z7D3 282 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 KRTAP1-3Q8IUG1 177 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 PFN4Q8NHR9 129 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 IGFBPL1Q8WX77 278 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 MCUR1Q96AQ8 359 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 BPIFA2Q96DR5 249 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 CACNG6Q9BXT2 260 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 ABCD2Q9UBJ2 740 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 TMEM5Q9Y2B1 443 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 ARID1AO14497 2285 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 RAI1Q7Z5J4 1906 aaPredicted RBP12.33□□□□□ -0.44
LIG1-218ENST00000599322 EFCAB9A8MZ26 197 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 SMAD7O15105 426 aaKnown RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 PTHP01270 115 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 F13BP05160 661 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ERCC1P07992 297 aaPredicted RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 NCK1P16333 377 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 NUDT6P53370 316 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 SMIM11AP58511 58 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 DSCR9P59020 149 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 GALK2Q01415 458 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 NAAAQ02083 359 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 MELKQ14680 651 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 CLEC9AQ6UXN8 241 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 PIGWQ7Z7B1 504 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 OAFQ86UD1 273 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 TSPYL5Q86VY4 417 aaPredicted RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 PGAM4Q8N0Y7 254 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 FNDC8Q8TC99 324 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 LIPHQ8WWY8 451 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 TMEM54Q969K7 222 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 FBXO17Q96EF6 278 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 RBP7Q96R05 134 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 SMR3AQ99954 134 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 RHNO1Q9BSD3 238 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ANKRD19PQ9H560 264 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 RNF121Q9H920 327 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 RHCGQ9UBD6 479 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 CRNNQ9UBG3 495 aaPredicted RBP12.32□□□□□ -0.44
LIG1-218ENST00000599322 EGFL7Q9UHF1 273 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 A4GNTQ9UNA3 340 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 ENPP4Q9Y6X5 453 aa12.32□□□□□ -0.44
LIG1-218ENST00000599322 PRR14LQ5THK1 2151 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 DHHO43323 396 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 SEC14L2O76054 403 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 QDPRP09417 244 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 CECR9P0C854 216 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 B4GALT1P15291 398 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 ACADSP16219 412 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
LIG1-218ENST00000599322 SERPINF1P36955 418 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 AQP2P41181 271 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 SLC9A3P48764 834 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 RAB1AP62820 205 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 PLP2Q04941 152 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 PIGFQ07326 219 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 SLC36A2Q495M3 483 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 SPATS1Q496A3 300 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 PHYHD1Q5SRE7 291 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 TMEM53Q6P2H8 277 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 CLEC2AQ6UVW9 174 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 MDP1Q86V88 176 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 LRMDAQ9H2I8 198 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 CA10Q9NS85 328 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
LIG1-218ENST00000599322 A6NIZ1 184 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 B9A039 149 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 SSX4O60224 188 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 PDE5AO76074 875 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 STAMBPO95630 424 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 CD8AP01732 235 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 HLA-HP01893 362 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms