RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 FLVCR1Q9Y5Y0 555 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 MED12Q93074 2177 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 IGKV3D-15A0A087WSY6 115 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SLC35F4A4IF30 521 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 PTGES3LE9PB15 166 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 H7C1C5 153 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 TRMUO75648 421 aaKnown RBP13.75□□□□□ -0.21
UPF1-206ENST00000598471 DBTP11182 482 aaKnown RBP13.75□□□□□ -0.21
UPF1-206ENST00000598471 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
UPF1-206ENST00000598471 GABRA1P14867 456 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SPI1P17947 270 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 CRABP1P29762 137 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 PTGER4P35408 488 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 MTNR1AP48039 350 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 CENPAP49450 140 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 LCN6P62502 163 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 NHLRC1Q6VVB1 395 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 NOXO1Q8NFA2 376 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 BBS1Q8NFJ9 593 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 ABHD3Q8WU67 409 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 PTP4A1Q93096 173 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SNRNP40Q96DI7 357 aaKnown RBP13.75□□□□□ -0.21
UPF1-206ENST00000598471 RBP7Q96R05 134 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 KCNK17Q96T54 332 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 DDOQ99489 341 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SLX1AQ9BQ83 275 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 EMC6Q9BV81 110 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SYT4Q9H2B2 425 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 GP6Q9HCN6 339 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 AMBNQ9NP70 447 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 MOKQ9UQ07 419 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 SNX5Q9Y5X3 404 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 FKBP7Q9Y680 259 aa13.75□□□□□ -0.21
UPF1-206ENST00000598471 A0A087WXM4 84 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 FIGNL2A6NMB9 653 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 RGS10O43665 173 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 MRPS14O60783 128 aaKnown RBP13.74□□□□□ -0.21
UPF1-206ENST00000598471 WDR1O75083 606 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 SLC43A1O75387 559 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 TPOP07202 933 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 ABOP16442 354 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 ATP6V1E1P36543 226 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 CSNK1A1P48729 337 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 TDGF1P3P51864 188 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 BLVRAP53004 296 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 RBPJQ06330 500 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 RAB40BQ12829 278 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 POU4F2Q12837 409 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 CAMK2DQ13557 499 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 AHSA2Q719I0 299 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 AAED1Q7RTV5 226 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 STX19Q8N4C7 294 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 TSPAN14Q8NG11 270 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 OR5M9Q8NGP3 310 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 INTS12Q96CB8 462 aaKnown RBP13.74□□□□□ -0.21
UPF1-206ENST00000598471 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
UPF1-206ENST00000598471 TRIB1Q96RU8 372 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 HCAR1Q9BXC0 346 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 DUSP21Q9H596 190 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 ASB6Q9NWX5 421 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 CLCF1Q9UBD9 225 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 SCOCQ9UIL1 159 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 KIAA1549Q9HCM3 1950 aa13.74□□□□□ -0.21
UPF1-206ENST00000598471 TTLL8A6PVC2 850 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 WISP2O76076 250 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 AQP8O94778 261 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 GLCEO94923 617 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 PRB1P04280 392 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 GYPBP06028 91 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 HOXD4P09016 255 aaPredicted RBP13.73□□□□□ -0.21
UPF1-206ENST00000598471 PGA4P0DJD7 388 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 PGA3P0DJD8 388 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 SLC2A5P22732 501 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 SLC15A1P46059 708 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 SLC35A2P78381 396 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 RUNX1T1Q06455 604 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
UPF1-206ENST00000598471 THEM4Q5T1C6 240 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 CARD17Q5XLA6 110 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 OR2A2Q6IF42 318 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 ZNF585AQ6P3V2 769 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 GFRALQ6UXV0 394 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 ZIC4Q8N9L1 334 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 OR6K6Q8NGW6 343 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 FAM57AQ8TBR7 257 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 GGHQ92820 318 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 OR2M2Q96R28 347 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 TEAD3Q99594 435 aa13.73□□□□□ -0.21
UPF1-206ENST00000598471 MRPL13Q9BYD1 178 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms