RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ETFDHQ16134 617 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF544Q6NX49 715 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF613Q6PF04 617 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 NHLRC1Q6VVB1 395 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 PATL1Q86TB9 770 aaKnown RBP11.97□□□□□ -0.49
SCAF1-203ENST00000598359 CALHM3Q86XJ0 350 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 LRRC17Q8N6Y2 441 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 FAM156AQ8NDB6 213 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ADPRHL1Q8NDY3 354 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ADAMTS16Q8TE57 1224 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ADAD1Q96M93 576 aaKnown RBP11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF184Q99676 751 aaPredicted RBP11.97□□□□□ -0.49
SCAF1-203ENST00000598359 TMEM43Q9BTV4 400 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
SCAF1-203ENST00000598359 MRPL39Q9NYK5 338 aaKnown RBP11.97□□□□□ -0.49
SCAF1-203ENST00000598359 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 AP3M1Q9Y2T2 418 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 CORINQ9Y5Q5 1042 aa11.97□□□□□ -0.49
SCAF1-203ENST00000598359 ANK3Q12955 4377 aaKnown RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 LOC102725191A0A1B0GVB3 256 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 SLC35F4A4IF30 521 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 RPL36A-HNRNPH2H7BZ11 118 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 CHP2O43745 196 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 FMO6PO60774 539 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 STAMBPO95630 424 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 BAG2O95816 211 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 CH25HO95992 272 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ATP6V1B2P21281 511 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 APOBEC3AP31941 199 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 CAPZA2P47755 286 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 GSK3BP49841 420 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ERFP50548 548 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 MFSD13AQ14CX5 517 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 RAB35Q15286 201 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 MST1LQ2TV78 715 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 MDP1Q86V88 176 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 DHFR2Q86XF0 187 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 SLC30A8Q8IWU4 369 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 C20orf196Q8IYI0 205 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF525Q8N782 197 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 SCAIQ8N9R8 606 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 OR6S1Q8NH40 331 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 MAGEE2Q8TD90 523 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ECSITQ9BQ95 431 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 PCDHAC1Q9H158 963 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 EVA1AQ9H8M9 152 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ARMC1Q9NVT9 282 aa11.96□□□□□ -0.49
SCAF1-203ENST00000598359 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
SCAF1-203ENST00000598359 ALPK2Q86TB3 2170 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 CR1P17927 2039 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 TRAPPC13A5PLN9 417 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 AKAP8O43823 692 aaKnown RBP11.95□□□□□ -0.5
SCAF1-203ENST00000598359 GPRIN2O60269 458 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 ADORA3P0DMS8 318 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
SCAF1-203ENST00000598359 NAAAQ02083 359 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 NPRL3Q12980 569 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 INTS11Q5TA45 600 aaKnown RBP11.95□□□□□ -0.5
SCAF1-203ENST00000598359 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 CARM1Q86X55 608 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 OR5J2Q8NH18 312 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF583Q96ND8 569 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 KCNS3Q9BQ31 491 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 KATNB1Q9BVA0 655 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 NOX3Q9HBY0 568 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 CRNNQ9UBG3 495 aaPredicted RBP11.95□□□□□ -0.5
SCAF1-203ENST00000598359 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 NOX1Q9Y5S8 564 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 SNX13Q9Y5W8 968 aa11.95□□□□□ -0.5
SCAF1-203ENST00000598359 HEATR1Q9H583 2144 aaKnown RBP11.95□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF726A6NNF4 738 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF99A8MXY4 864 aaPredicted RBP11.94□□□□□ -0.5
SCAF1-203ENST00000598359 H7C417 338 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ARPC2O15144 300 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 IGLV1-44P01699 117 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 HLA-HP01893 362 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 CRYAAP02489 173 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 IFNGR1P15260 489 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 PEX2P28328 305 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 OR1E2P47887 323 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 BIDP55957 195 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 PPP2R2BQ00005 443 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 HGFACQ04756 655 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 LIPEQ05469 1076 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 CHRNB3Q05901 458 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 PIGFQ07326 219 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 MELKQ14680 651 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 TRIP10Q15642 601 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ADIPOQQ15848 244 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF74Q16587 644 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms