RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 SNAP29O95721 258 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 C1QCP02747 245 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 NQO1P15559 274 aaKnown RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 OMGP23515 440 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 PCGF2P35227 344 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 CRISP3P54108 245 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 FBLN7Q53RD9 439 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 SPANXN4Q5MJ08 99 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF362Q5T0B9 420 aaPredicted RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 C16orf87Q6PH81 154 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 C6orf89Q6UWU4 347 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 PIWIL3Q7Z3Z3 882 aaKnown RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 NET1Q7Z628 596 aaPredicted RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 SERPINA11Q86U17 422 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 CLIP4Q8N3C7 705 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 PAQR4Q8N4S7 273 aaPredicted RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 MNS1Q8NEH6 495 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 OR4F5Q8NH21 305 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 TAAR8Q969N4 342 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 PANX1Q96RD7 426 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 CITED1Q99966 193 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 EMC6Q9BV81 110 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 BCL2L14Q9BZR8 327 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 OR51B6Q9H340 312 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 GRPEL1Q9HAV7 217 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 C12orf10Q9HB07 376 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 BEX1Q9HBH7 125 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 CDH20Q9HBT6 801 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 MMP26Q9NRE1 261 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 MKS1Q9NXB0 559 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 POLR3KQ9Y2Y1 108 aaPredicted RBP8.58□□□□□ -1.04
TRIM28-210ENST00000597618 GPR45Q9Y5Y3 372 aa8.58□□□□□ -1.04
TRIM28-210ENST00000597618 SMIM23A6NLE4 172 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF726A6NNF4 738 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 E9PBE3 544 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 HPRP00739 348 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 IGHV3-13P01766 116 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 OR8G3PP0DMU2 310 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 HLA-DOBP13765 273 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF12P17014 697 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 MAKP20794 623 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 S100A3P33764 101 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 CSNK1A1P48729 337 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF81P51508 661 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 RAG2P55895 527 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 ERVS71-1P61550 626 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 GLO1Q04760 184 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SRSF4Q08170 494 aaKnown RBP8.57□□□□□ -1.04
TRIM28-210ENST00000597618 PMS2P3Q13401 168 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 MAPK11Q15759 364 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 TBC1D28Q2M2D7 210 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 COX20Q5RI15 118 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 DPPA2Q7Z7J5 298 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SKA3Q8IX90 412 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SPICQ8N5J4 248 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SCAIQ8N9R8 606 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 ICA1LQ8NDH6 482 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 GTF3AQ92664 365 aaKnown RBP8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SLC35B4Q969S0 331 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 APOPT1Q96IL0 206 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 SPATA9Q9BWV2 254 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 TXLNGYQ9BZA5 131 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 EGLN1Q9GZT9 426 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 AKTIPQ9H8T0 292 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 TCF7L2Q9NQB0 619 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 KLHL14Q9P2G3 628 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 RPS6KB2Q9UBS0 482 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 INSIG2Q9Y5U4 225 aa8.57□□□□□ -1.04
TRIM28-210ENST00000597618 A0A087WUJ7 227 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 PLSCR5A0PG75 271 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 MS4A18H0YCH9 400 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 TM9SF1O15321 606 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 SPRY3O43610 288 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 UBOX5O94941 541 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 MFN2O95140 757 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 FARS2O95363 451 aaKnown RBP8.56□□□□□ -1.04
TRIM28-210ENST00000597618 KRT75O95678 551 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 PTHP01270 115 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 IGHV1-46P01743 117 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 SHBGP04278 402 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 CRYBA1P05813 215 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 BCHEP06276 602 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 FAM153BP0C7A2 387 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 PATE4P0C8F1 98 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 CCL2P13500 99 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 CBLP22681 906 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 UCP2P55851 309 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 PUDPQ08623 228 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 LRRC74AQ0VAA2 488 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 MS4A18Q3C1V0 323 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 PDCD4Q53EL6 469 aaKnown RBP8.56□□□□□ -1.04
TRIM28-210ENST00000597618 OLFML2AQ68BL7 652 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 TMEM53Q6P2H8 277 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF621Q6ZSS3 439 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 RHOUQ7L0Q8 258 aa8.56□□□□□ -1.04
TRIM28-210ENST00000597618 IFT20Q8IY31 132 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms