RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 TUBA1CQ9BQE3 449 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 ALG12Q9BV10 488 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 MRPS26Q9BYN8 205 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 H2AFY2Q9P0M6 372 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 TNFRSF10DQ9UBN6 386 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 ZMIZ1Q9ULJ6 1067 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 FKBP7Q9Y680 259 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
SHKBP1-211ENST00000595945 BOD1L1Q8NFC6 3051 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SLC35F4A4IF30 521 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SLC22A31A6NKX4 558 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 J3QRE1 110 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 RGS10O43665 173 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 ZNF432O94892 652 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SYNGR4O95473 234 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 MT-ND2P03891 347 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 GYPBP06028 91 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 MTNR1AP48039 350 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 LGALS3BPQ08380 585 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 RAB40BQ12829 278 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 BLMHQ13867 455 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 IRF3Q14653 427 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 LINC01590Q5TEZ4 76 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 EEF1A1P5Q5VTE0 462 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 B3GNT6Q6ZMB0 384 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 ZBTB46Q86UZ6 589 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 OR6V1Q8N148 313 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 OTULINQ96BN8 352 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SARAFQ96BY9 339 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 TEAD3Q99594 435 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 EMC6Q9BV81 110 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SYT4Q9H2B2 425 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 OR51V1Q9H2C8 321 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 RNF122Q9H9V4 155 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 RPRD1BQ9NQG5 326 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 ZNF175Q9Y473 711 aa13.11□□□□□ -0.31
SHKBP1-211ENST00000595945 IGLV1-36A0A0B4J1U3 117 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 NPIPA2E9PIF3 369 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 NPIPA3F8WFD2 350 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 DCTN6O00399 190 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 GLCEO94923 617 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 STSP08842 583 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 PGA4P0DJD7 388 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 PGA3P0DJD8 388 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 GSTT1P30711 240 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 CLDN17P56750 224 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 MVKQ03426 396 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 RASGEF1BQ0VAM2 473 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 GGTLC2Q14390 218 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 PON3Q15166 354 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 HIST3H3Q16695 136 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 LCN1P1Q5VSP4 162 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 TMEM123Q8N131 208 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 OR52I1Q8NGK6 324 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 OR2T4Q8NH00 348 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 POLEQ07864 2286 aa13.1□□□□□ -0.31
SHKBP1-211ENST00000595945 ZNF724A8MTY0 619 aa13.09□□□□□ -0.31
SHKBP1-211ENST00000595945 AQP8O94778 261 aa13.09□□□□□ -0.31
SHKBP1-211ENST00000595945 IGHG1P01857 330 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms