RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	SCARB2	Q14108	478 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	WBP2NL	Q6ICG8	309 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	REEP3	Q6NUK4	255 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	GPAT4	Q86UL3	456 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SLC35B4	Q969S0	331 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	DDIT4L	Q96D03	193 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CGREF1	Q99674	301 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MS4A5	Q9H3V2	200 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ARMC7	Q9H6L4	198 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PRDM4	Q9UKN5	801 aa		11.75	□□□□□ -0.53
SHKBP1-208	ENST00000595726		J3QLI3	93 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	FBP2	O00757	339 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	DEAF1	O75398	565 aa	Predicted RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	VIM	P08670	466 aa	Known RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NAT2	P11245	290 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NR4A1	P22736	598 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PRKAR1B	P31321	381 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MTPN	P58546	118 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	COPZ1	P61923	177 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ARF1	P84077	181 aa	Known RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	POU3F1	Q03052	451 aa	Predicted RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	BAMBI	Q13145	260 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NFYC	Q13952	458 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CEACAM7	Q14002	265 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SELPLG	Q14242	412 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ALKBH6	Q3KRA9	238 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	FBLN7	Q53RD9	439 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	DHRS4L2	Q6PKH6	230 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PAQR6	Q6TCH4	344 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	DOK3	Q7L591	496 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	COMTD1	Q86VU5	262 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PTOV1	Q86YD1	416 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CADM2	Q8N3J6	435 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	FAM169B	Q8N8A8	192 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF48	Q96MX3	618 aa	Predicted RBP	11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF69	Q9UC07	566 aa		11.74	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PAX7	P23759	505 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SLC6A2	P23975	617 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CXCR1	P25024	350 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	AQP1	P29972	269 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	GCH1	P30793	250 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MAGEB1	P43366	347 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	HOXC5	Q00444	222 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ROR2	Q01974	943 aa	Known RBP	11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	TUSC1	Q2TAM9	212 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	GLIPR1L2	Q4G1C9	344 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MDP1	Q86V88	176 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	KRT73	Q86Y46	540 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	HIPK4	Q8NE63	616 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF837	Q96EG3	531 aa	Predicted RBP	11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MS4A3	Q96HJ5	214 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CCT8L2	Q96SF2	557 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SPATA5L1	Q9BVQ7	753 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF416	Q9BWM5	594 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MRGBP	Q9NV56	204 aa		11.73	□□□□□ -0.53
SHKBP1-208	ENST00000595726	TPST1	O60507	370 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SEC14L2	O76054	403 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	RNASE1	P07998	156 aa	Known RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PCGF2	P35227	344 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MDH1	P40925	334 aa	Known RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	EVX1	P49640	407 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PCBP3	P57721	371 aa	Known RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	LCN2	P80188	198 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	RBBP4	Q09028	425 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	BNIP2	Q12982	314 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	KLF10	Q13118	480 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	OR7A5	Q15622	319 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CYP51A1	Q16850	503 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	TRMT5	Q32P41	509 aa	Known RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	TMEM225	Q6GV28	225 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NIPAL3	Q6P499	406 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CREB3L2	Q70SY1	520 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NET1	Q7Z628	596 aa	Predicted RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	C11orf65	Q8NCR3	313 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ZNF607	Q96SK3	696 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	KAT8	Q9H7Z6	458 aa	Known RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SAR1A	Q9NR31	198 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	KLHL14	Q9P2G3	628 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	DUSP13	Q9UII6	198 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ANGPT4	Q9Y264	503 aa		11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SOX21	Q9Y651	276 aa	Predicted RBP	11.72	□□□□□ -0.53
SHKBP1-208	ENST00000595726	PRORSD1P	A6NEY8	169 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	LIPT2	A6NK58	231 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726		A8MVM7	634 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	FXYD1	O00168	92 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ATP8B1	O43520	1251 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	NPIPB7	O75200	414 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	IGHV2-5	P01817	119 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	GPI	P06744	558 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	HOXB1	P14653	301 aa	Predicted RBP	11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	HTR2A	P28223	471 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	ARR3	P36575	388 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CAPZA2	P47755	286 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	CCL8	P80075	99 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	MRPS11	P82912	194 aa	Known RBP	11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	SLC9A3R2	Q15599	337 aa		11.71	□□□□□ -0.53
SHKBP1-208	ENST00000595726	COQ5	Q5HYK3	327 aa		11.71	□□□□□ -0.53

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