RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CLCF1Q9UBD9 225 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 OR6C76A6NM76 312 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TP53I11O14683 189 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 HS3ST1O14792 307 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TO15178 435 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 PRKYO43930 277 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 PIP5K1CO60331 668 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ENTPD6O75354 484 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 LCKP06239 509 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ADORA3P0DMS8 318 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF91Q05481 1191 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ST3GAL4Q11206 333 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM44Q2T9K0 475 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 BEX5Q5H9J7 111 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ACSM5Q6NUN0 579 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 RPL13AP3Q6NVV1 102 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 VWA1Q6PCB0 445 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 WDR88Q6ZMY6 472 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF367Q7RTV3 350 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 STX19Q8N4C7 294 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TCEANCQ8N8B7 351 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 CNEP1R1Q8N9A8 125 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM239Q8WW34 195 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 ADIPOR1Q96A54 375 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 RACGAP1Q9H0H5 632 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 OPN3Q9H1Y3 402 aaPredicted RBP11.4□□□□□ -0.58
SCAF1-202ENST00000595242 SLCO5A1Q9H2Y9 848 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 DSN1Q9H410 356 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 EGLN3Q9H6Z9 239 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 EXOSC3Q9NQT5 275 aaKnown RBP11.4□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 FLRT3Q9NZU0 649 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 WARS2Q9UGM6 360 aaKnown RBP11.4□□□□□ -0.58
SCAF1-202ENST00000595242 SLC35A3Q9Y2D2 325 aa11.4□□□□□ -0.58
SCAF1-202ENST00000595242 RPL36Q9Y3U8 105 aaKnown RBP11.4□□□□□ -0.58
SCAF1-202ENST00000595242 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 A0A1B0GWA3 101 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 A0A1W2PPW3 197 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 IRGMA1A4Y4 181 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 OVOL3O00110 214 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 SLC22A1O15245 554 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 ADAM11O75078 769 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 DBTP11182 482 aaKnown RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 PSMB9P28065 219 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 GRK5P34947 590 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 FBXW4P57775 412 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 AQP6Q13520 282 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 EBPQ15125 230 aaKnown RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 PGGHGQ32M88 737 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 KLHL26Q53HC5 615 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 SYT14P1Q58G82 188 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 DNM1P46Q6ZS02 220 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 SLC29A4Q7RTT9 530 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 C17orf47Q8NEP4 570 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 LCORQ96JN0 433 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 SLC38A2Q96QD8 506 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 IL4I1Q96RQ9 567 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 SHARPINQ9H0F6 387 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 TVP23BQ9NYZ1 205 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 MRTO4Q9UKD2 239 aaKnown RBP11.39□□□□□ -0.59
SCAF1-202ENST00000595242 OR10H1Q9Y4A9 318 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 CADP27708 2225 aa11.39□□□□□ -0.59
SCAF1-202ENST00000595242 HTR3EA5X5Y0 456 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 UNC119BA6NIH7 251 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 M0R082 166 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 CDC42EP2O14613 210 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 GNB5O14775 395 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 PRODHO43272 600 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 NTN1O95631 604 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TGM6O95932 706 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 IGF2P01344 180 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 CRHP06850 196 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 NGFRP08138 427 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 ADRA2AP08913 450 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 CDKN1AP38936 164 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 GPR4P46093 362 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TIGD3Q6B0B8 471 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 LINC00299Q6ZSB3 139 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 SLC46A3Q7Z3Q1 461 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF527Q8NB42 609 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 OR4Q3Q8NH05 313 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TMEM41AQ96HV5 264 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF582Q96NG8 517 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TSSK6Q9BXA6 273 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 WWTR1Q9GZV5 400 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 NXF5Q9H1B4 397 aaKnown RBP11.38□□□□□ -0.59
SCAF1-202ENST00000595242 FN3KQ9H479 309 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 FGF20Q9NP95 211 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-202ENST00000595242 UBQLN4Q9NRR5 601 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 TBC1D23Q9NUY8 699 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms