RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PIWIL3Q7Z3Z3 882 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 LRRC17Q8N6Y2 441 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 NUP37Q8NFH4 326 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 ANKRD19PQ9H560 264 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 INIPQ9NRY2 104 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 NDE1Q9NXR1 346 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 A4GNTQ9UNA3 340 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 ARL2BPQ9Y2Y0 163 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 ABCA2Q9BZC7 2435 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 HEATR1Q9H583 2144 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 PLCE1Q9P212 2302 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 TRIM64A6NGJ6 449 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 TRIM64BA6NI03 449 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 SHOX2O60902 331 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 FARS2O95363 451 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 SERPINA1P01009 418 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 IDH3GP51553 393 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 SNRPD2P62316 118 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 TUBA1BP68363 451 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 TUBA4AP68366 448 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 RAB35Q15286 201 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 NRN1LQ496H8 165 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 PHYHD1Q5SRE7 291 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 TUBA1AQ71U36 451 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 RNF113BQ8IZP6 322 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 PFN4Q8NHR9 129 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 HSH2DQ96JZ2 352 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 NDEL1Q9GZM8 345 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF442Q9H7R0 627 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 CA10Q9NS85 328 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 SAMD4AQ9UPU9 718 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 USF3Q68DE3 2245 aa15.43■□□□□ 0.06
SHKBP1-204ENST00000594862 RAB36O95755 333 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 CSF3P09919 207 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 TSPAN19P0C672 248 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 PGA4P0DJD7 388 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 PGA3P0DJD8 388 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 B4GALT1P15291 398 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF84P51523 738 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 NUDT6P53370 316 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 CLRN1P58418 232 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 NPRL3Q12980 569 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 FAM205BPQ63HN1 556 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 VTCN1Q7Z7D3 282 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 MDP1Q86V88 176 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 CDK20Q8IZL9 346 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 NOXO1Q8NFA2 376 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 FNDC8Q8TC99 324 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 ACOT11Q8WXI4 607 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 BPIFA2Q96DR5 249 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 LRRC37BQ96QE4 947 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 C20orf141Q9NUB4 165 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 ADA2Q9NZK5 511 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 HIF3AQ9Y2N7 669 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 SPEF1Q9Y4P9 236 aa15.42■□□□□ 0.06
SHKBP1-204ENST00000594862 B9A039 149 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SEC14L2O76054 403 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 OR8G3PP0DMU2 310 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 CD79AP11912 226 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 IFI30P13284 250 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SERPINF1P36955 418 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SLC9A3P48764 834 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 MELKQ14680 651 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 EFNB3Q15768 340 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SPATS1Q496A3 300 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 CLEC2AQ6UVW9 174 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SEPHS2Q99611 448 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 GSX1Q9H4S2 264 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SMURF2Q9HAU4 748 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 B3GNT2Q9NY97 397 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 FAM32AQ9Y421 112 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 FKBP7Q9Y680 259 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 ENPP4Q9Y6X5 453 aa15.41■□□□□ 0.06
SHKBP1-204ENST00000594862 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 DHHO43323 396 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 HLA-HP01893 362 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 SAGP10523 405 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 ACADSP16219 412 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 ACVR1BP36896 505 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 AQP2P41181 271 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 MNAT1P51948 309 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 TNK1Q13470 666 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 ALG10Q5BKT4 473 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF730Q6ZMV8 503 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 DNM1P46Q6ZS02 220 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 RRM2BQ7LG56 351 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 PGAM4Q8N0Y7 254 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 SLC22A24Q8N4F4 322 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 ASB10Q8WXI3 467 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 RHNO1Q9BSD3 238 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 C1orf198Q9H425 327 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 KRCC1Q9NPI7 259 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 TMEM38BQ9NVV0 291 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 TAGLN3Q9UI15 199 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 MAGEL2Q9UJ55 1249 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 TMEM5Q9Y2B1 443 aa15.4■□□□□ 0.06
SHKBP1-204ENST00000594862 IGHV2OR16-5A0A0B4J2B6 119 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 DYNC1I1O14576 645 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 F13BP05160 661 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms