RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 OAFQ86UD1 273 aa19.15■□□□□ 0.66
HOMER3-206ENST00000594439 AKAP1Q92667 903 aaKnown RBP eCLIP19.15■□□□□ 0.66
HOMER3-206ENST00000594439 MBD6Q96DN6 1003 aa19.15■□□□□ 0.66
HOMER3-206ENST00000594439 FAM46AQ96IP4 442 aaKnown RBP19.15■□□□□ 0.66
HOMER3-206ENST00000594439 ZNF347Q96SE7 839 aa19.15■□□□□ 0.66
HOMER3-206ENST00000594439 BTBD10Q9BSF8 475 aa19.15■□□□□ 0.66
HOMER3-206ENST00000594439 MRPL13Q9BYD1 178 aaKnown RBP19.15■□□□□ 0.66
HOMER3-206ENST00000594439 TXNIPQ9H3M7 391 aa19.15■□□□□ 0.66
HOMER3-206ENST00000594439 SH3PXD2BA1X283 911 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 MCIDASD6RGH6 385 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 M0R1B8 84 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 HS3ST1O14792 307 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TRMUO75648 421 aaKnown RBP19.14■□□□□ 0.65
HOMER3-206ENST00000594439 SEC14L2O76054 403 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 IGHG1P01857 330 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 PTAFRP25105 342 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 CD40P25942 277 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 MAGEA2P43356 314 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 UBE2NP61088 152 aaKnown RBP19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TUBA1BP68363 451 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TUBA4AP68366 448 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TRAP1Q12931 704 aaKnown RBP19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TESK1Q15569 626 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 HIST3H3Q16695 136 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 LRFN4Q6PJG9 635 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TMEM108Q6UXF1 575 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 C20orf204Q6ZNR8 217 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 TUBA1AQ71U36 451 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF627Q7L945 461 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 HDDC2Q7Z4H3 204 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 KBTBD8Q8NFY9 601 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 NEUROG1Q92886 237 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 HEATR1Q9H583 2144 aaKnown RBP19.14■□□□□ 0.65
HOMER3-206ENST00000594439 MAGIXQ9H6Y5 334 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 POFUT2Q9Y2G5 429 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 AKAP9Q99996 3911 aa19.14■□□□□ 0.65
HOMER3-206ENST00000594439 CENPBD1B2RD01 187 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 SHISA9B4DS77 424 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 ABCD4O14678 606 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 IGHMP01871 453 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 ACADSP16219 412 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF26P17031 533 aaPredicted RBP19.13■□□□□ 0.65
HOMER3-206ENST00000594439 RRM2P31350 389 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 CTXN1P60606 82 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 TAF11Q15544 211 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 ZBED5Q49AG3 693 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 IGFN1Q86VF2 1251 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 NOXO1Q8NFA2 376 aa19.13■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF503-AS2A6NEH8 195 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 PTP4A3O75365 173 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 PAX7P23759 505 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 CLRN1P58418 232 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 RPL27P61353 136 aaKnown RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 SPOCK1Q08629 439 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 TOP3AQ13472 1001 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF672Q499Z4 452 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF813Q6ZN06 617 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF611Q8N823 705 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 HDAC2Q92769 488 aaKnown RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 POP5Q969H6 163 aaKnown RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 LRGUKQ96M69 825 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 ALPK1Q96QP1 1244 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 GPA33Q99795 319 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 FOXB1Q99853 325 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 FOXC2Q99958 501 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 STX18Q9P2W9 335 aaKnown RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 CRNNQ9UBG3 495 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF346Q9UL40 294 aaKnown RBP19.12■□□□□ 0.65
HOMER3-206ENST00000594439 MGAT4BQ9UQ53 548 aa19.12■□□□□ 0.65
HOMER3-206ENST00000594439 OTOGQ6ZRI0 2925 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 DHHO43323 396 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 DNAJC8O75937 253 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 QDPRP09417 244 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF133P52736 654 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 ART1P52961 327 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 CHRNB3Q05901 458 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 DEFB113Q30KQ7 82 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 ZER1Q7Z7L7 766 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 SYT14Q8NB59 555 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 IGFBPL1Q8WX77 278 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 MCHR2Q969V1 340 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 NMD3Q96D46 503 aaKnown RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 RSRC1Q96IZ7 334 aaKnown RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 TSPAN32Q96QS1 320 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 CADM1Q9BY67 442 aaKnown RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 KRCC1Q9NPI7 259 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-206ENST00000594439 AURKCQ9UQB9 309 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 SIGLEC7Q9Y286 467 aa19.11■□□□□ 0.65
HOMER3-206ENST00000594439 PLCE1Q9P212 2302 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 IGHV1-18A0A0C4DH31 117 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 GSC2O15499 205 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 STAMBPO95630 424 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 B4GALT1P15291 398 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 HMGA2P52926 109 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 MYBPC1Q00872 1141 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 FAM98BQ52LJ0 330 aaKnown RBP19.1■□□□□ 0.65
HOMER3-206ENST00000594439 CCDC36Q8IYA8 594 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
HOMER3-206ENST00000594439 FAM169BQ8N8A8 192 aa19.1■□□□□ 0.65
HOMER3-206ENST00000594439 ZNF519Q8TB69 540 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms