RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ITIH4Q14624 930 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SPCS2Q15005 226 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SYPL1Q16563 259 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SGCAQ16586 387 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ZSWIM7Q19AV6 140 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 GLYR1Q49A26 553 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 TCHHL1Q5QJ38 904 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 FAM71F2Q6NXP2 309 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ULK3Q6PHR2 472 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 PID1Q7Z2X4 250 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ZFAND4Q86XD8 727 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 TMEM123Q8N131 208 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 OR4D6Q8NGJ1 314 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 OR10G7Q8NGN6 311 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 OR9G4Q8NGQ1 327 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SMARCD2Q92925 531 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 FAM131CQ96AQ9 280 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SH3YL1Q96HL8 342 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 AKR1E2Q96JD6 320 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 C9orf72Q96LT7 481 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 COPS8Q99627 209 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 TSSK1BQ9BXA7 367 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 OR2AG1Q9H205 316 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SLC38A1Q9H2H9 487 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 C12orf10Q9HB07 376 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 POLD4Q9HCU8 107 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SLC40A1Q9NP59 571 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 RAB18Q9NP72 206 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 PHF11Q9UIL8 331 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 POFUT2Q9Y2G5 429 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 OTOGLQ3ZCN5 2332 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 FRMPD3Q5JV73 1810 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 WDFY3Q8IZQ1 3526 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ELP1O95163 1332 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 IGHV3OR16-10A0A075B7F0 116 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 SMCO2A6NFE2 343 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ARGFXA6NJG6 315 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 A8MXK9 166 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 TCP10L2B9ZVM9 353 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 E5RI56 91 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LRRN3E7EW58 273 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 K7EQD1 137 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 PGRMC1O00264 195 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 TOX3O15405 576 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 EMC8O43402 210 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 PI15O43692 258 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CST4P01036 141 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 RPN2P04844 631 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 IFNA6P05013 189 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CTXN2P0C2S0 81 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 HSMCR30P0CW71 290 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 B4GALT1P15291 398 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CTRB1P17538 263 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 C4BPBP20851 252 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 HNRNPH3P31942 346 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CDH5P33151 784 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 OR3A3P47888 321 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 UQCRFS1P47985 274 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ACLYP53396 1101 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 GEMP55040 296 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 AP3S2P59780 193 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 PLP1P60201 277 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 IL9RQ01113 521 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 RAD51Q06609 339 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CDC20Q12834 499 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 TSPAN31Q12999 210 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 EXOSC2Q13868 293 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 MS4A18Q3C1V0 323 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LINC01620Q4KN68 170 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 COQ5Q5HYK3 327 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF691Q5VV52 312 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LIPKQ5VXJ0 399 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 RNLSQ5VYX0 342 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CTRB2Q6GPI1 263 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 OR4F3Q6IEY1 312 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CAPN13Q6MZZ7 669 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF343Q6P1L6 599 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CLEC18BQ6UXF7 455 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 VITQ6UXI7 678 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 GCNT7Q6ZNI0 430 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LRRC74BQ6ZQY2 392 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 MRPL21Q7Z2W9 205 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 C5orf24Q7Z6I8 188 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 SLC22A15Q8IZD6 547 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ALLCQ8N6M5 410 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 FBXO36Q8NEA4 188 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 OR2L3Q8NG85 312 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LRRC15Q8TF66 581 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 DUS3LQ96G46 650 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 NAT9Q9BTE0 207 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 DPH7Q9BTV6 452 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 NDUFAF3Q9BU61 184 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LRRN3Q9H3W5 708 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 FAM124BQ9H5Z6 455 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 LPAR2Q9HBW0 351 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CD209Q9NNX6 404 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 OR2S2Q9NQN1 319 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 CD274Q9NZQ7 290 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ABCD2Q9UBJ2 740 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms