RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FGF20Q9NP95 211 aaPredicted RBP12.03□□□□□ -0.48
VMP1-217ENST00000593168 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 B3GAT1Q9P2W7 334 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
VMP1-217ENST00000593168 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 A6NHS1 94 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 EIF1AYO14602 144 aaKnown RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 XKRYO14609 159 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 TNFSF11O14788 317 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 BCL10O95999 233 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 RENP00797 406 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 MT-ND2P03891 347 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 HLA-DOBP13765 273 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 PCMT1P22061 227 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 DCKP27707 260 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 C21orf33P30042 268 aaPredicted RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 CARD18P57730 90 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 HSF1Q00613 529 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 IRF3Q14653 427 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 ZNF169Q14929 603 aaPredicted RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 KLHL12Q53G59 568 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 MESTQ5EB52 335 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 SLC35D3Q5M8T2 416 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 SLC35D2Q76EJ3 337 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 OR52I1Q8NGK6 324 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 PRR7Q8TB68 274 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 ASB10Q8WXI3 467 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 ABTB1Q969K4 478 aaPredicted RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 OTULINQ96BN8 352 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 OR51V1Q9H2C8 321 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 SLC6A15Q9H2J7 730 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 MED20Q9H944 212 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 TIGARQ9NQ88 270 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 ERRFI1Q9UJM3 462 aaPredicted RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 DIMT1Q9UNQ2 313 aaKnown RBP12.02□□□□□ -0.49
VMP1-217ENST00000593168 MOKQ9UQ07 419 aa12.02□□□□□ -0.49
VMP1-217ENST00000593168 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 TRGV5A0A0B4J1U4 118 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 DPPA5A6NC42 116 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 WIPF3A6NGB9 483 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 ZNF814B7Z6K7 855 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 NPIPA5E9PKD4 350 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 AHCYL1O43865 530 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 SERPINI2O75830 405 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 FADS2O95864 444 aaKnown RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 PLGP00747 810 aaPredicted RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 IFNGR1P15260 489 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 ZNF708P17019 499 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 SPI1P17947 270 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 ENPP1P22413 925 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 LHX2P50458 406 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 CLDN15P56746 228 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 CLDN18P56856 261 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 POU3F1Q03052 451 aaPredicted RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 PON3Q15166 354 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 POU4F3Q15319 338 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 RNFT1Q5M7Z0 435 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 XAF1Q6GPH4 301 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 RPUSD3Q6P087 351 aaKnown RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 B3GNT6Q6ZMB0 384 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 TRILQ7L0X0 811 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 NEIL3Q8TAT5 605 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 TUBA1CQ9BQE3 449 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 TSPAN10Q9H1Z9 355 aaPredicted RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 ACOT13Q9NPJ3 140 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 VSX1Q9NZR4 365 aaPredicted RBP12.01□□□□□ -0.49
VMP1-217ENST00000593168 NPIPA1Q9UND3 350 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 ABCA12Q86UK0 2595 aa12.01□□□□□ -0.49
VMP1-217ENST00000593168 PRSS37A4D1T9 235 aa12□□□□□ -0.49
VMP1-217ENST00000593168 H0YC42 278 aa12□□□□□ -0.49
VMP1-217ENST00000593168 TRAF3IP2O43734 574 aaPredicted RBP12□□□□□ -0.49
VMP1-217ENST00000593168 RAB36O95755 333 aa12□□□□□ -0.49
VMP1-217ENST00000593168 IGHG3P01860 377 aa12□□□□□ -0.49
VMP1-217ENST00000593168 CLUP10909 449 aa12□□□□□ -0.49
VMP1-217ENST00000593168 ZNF24P17028 368 aa12□□□□□ -0.49
VMP1-217ENST00000593168 ZNF43P17038 809 aa12□□□□□ -0.49
VMP1-217ENST00000593168 GSTT1P30711 240 aa12□□□□□ -0.49
VMP1-217ENST00000593168 EIF1AXP47813 144 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 RPS3AP61247 264 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 RPS7P62081 194 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 POU4F2Q12837 409 aa12□□□□□ -0.49
VMP1-217ENST00000593168 C1DQ13901 141 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 GGTLC2Q14390 218 aa12□□□□□ -0.49
VMP1-217ENST00000593168 TBCEQ15813 527 aaPredicted RBP12□□□□□ -0.49
VMP1-217ENST00000593168 NEDD8Q15843 81 aa12□□□□□ -0.49
VMP1-217ENST00000593168 LCN1P1Q5VSP4 162 aa12□□□□□ -0.49
VMP1-217ENST00000593168 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
VMP1-217ENST00000593168 VASNQ6EMK4 673 aa12□□□□□ -0.49
VMP1-217ENST00000593168 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
VMP1-217ENST00000593168 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
VMP1-217ENST00000593168 MEIOBQ8N635 442 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms