RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	SOX7	Q9BT81	388 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	CHID1	Q9BWS9	393 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	DCLRE1B	Q9H816	532 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	RNPEPL1	Q9HAU8	725 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	EXOSC3	Q9NQT5	275 aa	Known RBP	11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	ARMC1	Q9NVT9	282 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	SLC13A4	Q9UKG4	626 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	CDC42EP3	Q9UKI2	254 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	SH3GLB1	Q9Y371	365 aa		11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	HEATR1	Q9H583	2144 aa	Known RBP	11.54	□□□□□ -0.56
NPC1-212	ENST00000591107	IGHV1-18	A0A0C4DH31	117 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	IGHV4-61	A0A0C4DH41	118 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	hCG_2039718	K7EN88	272 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107		M0R3H8	397 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	FABP3	P05413	133 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	ANPEP	P15144	967 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	USF1	P22415	310 aa	Predicted RBP	11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	OR1E2	P47887	323 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	SELENOP	P49908	381 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	EFNA4	P52798	201 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	SLC35A1	P78382	337 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	EPS8	Q12929	822 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	SLC17A1	Q14916	467 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	MST1L	Q2TV78	715 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	AAED1	Q7RTV5	226 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	CARM1	Q86X55	608 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	ZDHHC21	Q8IVQ6	265 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	CLIP4	Q8N3C7	705 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	CADM2	Q8N3J6	435 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	ZIC4	Q8N9L1	334 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	OR9K2	Q8NGE7	335 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	LRTOMT	Q8WZ04	291 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	DDIT4L	Q96D03	193 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	ARHGDIG	Q99819	225 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	SHARPIN	Q9H0F6	387 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	YY1AP1	Q9H869	796 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	AMDHD2	Q9Y303	409 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	CHST2	Q9Y4C5	530 aa		11.53	□□□□□ -0.56
NPC1-212	ENST00000591107	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.52	□□□□□ -0.57	2e-18	■■■□□ 16.7
NPC1-212	ENST00000591107		A0A096LPE4	126 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107		A0A1W2PPZ6	126 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	LIPT2	A6NK58	231 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	FRS3	O43559	492 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	LMX1B	O60663	402 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	IFNW1	P05000	195 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	CELA3B	P08861	270 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	FCGR1A	P12314	374 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	PRG2	P13727	222 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	HOXB6	P17509	224 aa	Known RBP	11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	MAGEA2	P43356	314 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	DSCR9	P59020	149 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	TBRG1	Q3YBR2	411 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	RNF220	Q5VTB9	566 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	CYB5R2	Q6BCY4	276 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	OR7E24	Q6IFN5	339 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	KLHL24	Q6TFL4	600 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	PQLC1	Q8N2U9	271 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	OR4D11	Q8NGI4	311 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	C7orf34	Q96L11	122 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	PKP2	Q99959	881 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	VRK1	Q99986	396 aa	Predicted RBP	11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	WFDC6	Q9BQY6	131 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	C19orf24	Q9BVV8	132 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	FKRP	Q9H9S5	495 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	IL1RAP	Q9NPH3	570 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	STX18	Q9P2W9	335 aa	Known RBP	11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	SEC14L4	Q9UDX3	406 aa		11.52	□□□□□ -0.57
NPC1-212	ENST00000591107	LRP5L	A4QPB2	252 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	CDHR4	A6H8M9	788 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	VWC2L	B2RUY7	222 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	DNPH1	O43598	174 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	UPK3A	O75631	287 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	SEC14L2	O76054	403 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	DIRAS1	O95057	198 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	FAS	P25445	335 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	MPG	P29372	298 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	CALCR	P30988	508 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	APOBEC3A	P31941	199 aa	Predicted RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	SLC1A3	P43003	542 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	P2RY4	P51582	365 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	RGS8	P57771	180 aa	Predicted RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	HOXC5	Q00444	222 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	FAM120AOS	Q5T036	256 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	PAQR6	Q6TCH4	344 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	DEF8	Q6ZN54	512 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	SLC46A3	Q7Z3Q1	461 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	TSEN54	Q7Z6J9	526 aa	Known RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	AMIGO2	Q86SJ2	522 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	RBM45	Q8IUH3	476 aa	Known RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	KDM8	Q8N371	416 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	C17orf78	Q8N4C9	275 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	OR1K1	Q8NGR3	316 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	OIT3	Q8WWZ8	545 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	TMEM45B	Q96B21	275 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	MSI2	Q96DH6	328 aa	Known RBP	11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	PIMREG	Q9BSJ6	248 aa		11.51	□□□□□ -0.57
NPC1-212	ENST00000591107	NAA11	Q9BSU3	229 aa	Predicted RBP	11.51	□□□□□ -0.57

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