RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CIB4A0PJX0 185 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 A6NIZ1 184 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 PDLIM1O00151 329 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 TRMUO75648 421 aaKnown RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 PPP1R3DO95685 299 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 PGA4P0DJD7 388 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 PGA3P0DJD8 388 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 IGFBP2P18065 325 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 FOXG1P55316 489 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 RAP1BP61224 184 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 RAP1AP62834 184 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 TGFBR3Q03167 851 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 TSC22D1Q15714 1073 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 PHYHD1Q5SRE7 291 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ANKRD34AQ69YU3 496 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 GPR139Q6DWJ6 353 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 KLHL17Q6TDP4 642 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 BHLHA15Q7RTS1 189 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 CLDN22Q8N7P3 220 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 SYT14Q8NB59 555 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 STEAP2Q8NFT2 490 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ZNF519Q8TB69 540 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 Q96M85 177 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ZNF570Q96NI8 536 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ERMAPQ96PL5 475 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 MRPL13Q9BYD1 178 aaKnown RBP16.86■□□□□ 0.29
DDX39A-214ENST00000590556 ULBP2Q9BZM5 246 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 CRLF2Q9HC73 371 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 GPR35Q9HC97 309 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 TBC1D23Q9NUY8 699 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 IL20Q9NYY1 176 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 OAZ3Q9UMX2 235 aa16.86■□□□□ 0.29
DDX39A-214ENST00000590556 SAC3D1A6NKF1 404 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 CENPBD1B2RD01 187 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 RPL36A-HNRNPH2H7BZ11 118 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 XKRYO14609 159 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 SOX14O95416 240 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 BAG2O95816 211 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 ITGA5P08648 1049 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 IGFBP1P08833 259 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-214ENST00000590556 SDHAP31040 664 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 CCKARP32238 428 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 CLEC12AQ5QGZ9 265 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 FAHD1Q6P587 224 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 FAM122BQ7Z309 247 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 DMRTC2Q8IXT2 367 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-214ENST00000590556 PQLC1Q8N2U9 271 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 NOXO1Q8NFA2 376 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 LINC01560Q8TB33 94 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 MAGEE2Q8TD90 523 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-214ENST00000590556 DNAJC9Q8WXX5 260 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 HDAC2Q92769 488 aaKnown RBP16.85■□□□□ 0.29
DDX39A-214ENST00000590556 SPOCK3Q9BQ16 436 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 PLA2G12AQ9BZM1 189 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 ACTR6Q9GZN1 396 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 REV1Q9UBZ9 1251 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 NDRG3Q9UGV2 375 aa16.85■□□□□ 0.29
DDX39A-214ENST00000590556 ANKHD1Q8IWZ3 2542 aaKnown RBP16.85■□□□□ 0.29
DDX39A-214ENST00000590556 TEX13CA0A0J9YWL9 993 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 TUBAL3A6NHL2 446 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 H3BN98 237 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 IMPA2O14732 288 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 ARPC3O15145 178 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 ARHGEF9O43307 516 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 TP53P04637 393 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-214ENST00000590556 APEHP13798 732 aaKnown RBP16.84■□□□□ 0.29
DDX39A-214ENST00000590556 CDH2P19022 906 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-214ENST00000590556 COL8A1P27658 744 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 KIR2DL3P43628 341 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 DAPP51397 102 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 HIST3H3Q16695 136 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 CEACAM16Q2WEN9 425 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 SLC36A3Q495N2 470 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 ACBD4Q8NC06 268 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 OR8D4Q8NGM9 314 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 S100PBPQ96BU1 408 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 RASD2Q96D21 266 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 KCNK17Q96T54 332 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 ALG12Q9BV10 488 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 TSSK6Q9BXA6 273 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 OR10A4Q9H209 315 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 SMURF2Q9HAU4 748 aa16.84■□□□□ 0.29
DDX39A-214ENST00000590556 SOCS2O14508 198 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 IDH3BO43837 385 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 RAD51DO75771 328 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 TXNDC12O95881 172 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 QDPRP09417 244 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 NR2C1P13056 603 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 OSMP13725 252 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 COX6B1P14854 86 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 PPP3CBP16298 524 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 NOS3P29474 1203 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 SH3BGRP55822 239 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 ELF3P78545 371 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 ARF1P84077 181 aaKnown RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 MYBPC1Q00872 1141 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms