RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SUMO3P55854 103 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 MFSD13AQ14CX5 517 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 COL28A1Q2UY09 1125 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 LYSMD4Q5XG99 296 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 TMEM53Q6P2H8 277 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 STAC2Q6ZMT1 411 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 SHISA6Q6ZSJ9 500 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF676Q8N7Q3 588 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF417Q8TAU3 575 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 GPR148Q8TDV2 347 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 C15orf40Q8WUR7 153 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 SMIM4Q8WVI0 70 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 RNF170Q96K19 258 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 GFI1Q99684 422 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 IER2Q9BTL4 223 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 NIPAL2Q9H841 368 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 MRPL39Q9NYK5 338 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ETV7Q9Y603 341 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ASXL3Q9C0F0 2248 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 OR4C45A6NMZ5 311 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 AGRPO00253 132 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 PLPP3O14495 311 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ALOX12BO75342 701 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF254O75437 659 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 HLA-DQA2P01906 255 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 CD3GP09693 182 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 NAGAP17050 411 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 DPP4P27487 766 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 DGCR2P98153 550 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 MAB21L1Q13394 359 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 FDX2Q6P4F2 183 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 EID2Q8N6I1 236 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 NFAM1Q8NET5 270 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 S100A16Q96FQ6 103 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 DCBLD2Q96PD2 775 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 TSPAN10Q9H1Z9 355 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF275Q9NSD4 429 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 RARRES3Q9UL19 164 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ATXN7L1Q9ULK2 861 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 PPIEQ9UNP9 301 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 CPED1A4D0V7 1026 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 SRP9P49458 86 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 DCDP81605 110 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC18B1Q6NT16 456 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 FAM199XQ6PEV8 388 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF574Q6ZN55 896 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 OR5L2Q8NGL0 311 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 HSD17B8Q92506 261 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 OR6C1Q96RD1 312 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 GFM1Q96RP9 751 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 BEX2Q9BXY8 128 aa17.3■□□□□ 0.36
PRKCSH-209ENST00000589838 IGHV3-20A0A0C4DH32 117 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 A6NIZ1 184 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 C17orf51A8MQB3 221 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF593O00488 134 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 TPPPO94811 219 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ECDO95905 644 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 TCRBP04435 133 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 DCNP07585 359 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 CRABP1P29762 137 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 BTCP35070 178 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 APOBEC1P41238 236 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 DHPSP49366 369 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 RAG2P55895 527 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SCAND1P57086 179 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 RAP1BP61224 184 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 RAP1AP62834 184 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 MRPS10P82664 201 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 DMWDQ09019 674 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 KCTD18Q6PI47 426 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 FCRLAQ7L513 359 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ASCC1Q8N9N2 400 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 APCDD1LQ8NCL9 501 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 OR8B4Q96RC9 309 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 LIN7BQ9HAP6 207 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 PLEKHA1Q9HB21 404 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 PCNX3Q9H6A9 2034 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 TRBV5-7A0A0A0MS05 114 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 TRABD2BA6NFA1 517 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC16A7O60669 478 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SCRG1O75711 98 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 PLGP00747 810 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 C1QBP02746 253 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 CCR9P51686 369 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 EMP2P54851 167 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 AP3S2P59780 193 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ZP4Q12836 540 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 CDH24Q86UP0 819 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 OR8K3Q8NH51 312 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ORAI1Q96D31 301 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 CACNG6Q9BXT2 260 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ACTR6Q9GZN1 396 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SLA2Q9H6Q3 261 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ANKRD10Q9NXR5 420 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SLCO1C1Q9NYB5 712 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 SUSD2Q9UGT4 822 aa17.29■□□□□ 0.36
PRKCSH-209ENST00000589838 ARID1BQ8NFD5 2236 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms