RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RHNO1Q9BSD3 238 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ZNF175Q9Y473 711 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 SLC22A23A1A5C7 686 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 IGHG1P01857 330 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 LYNP07948 512 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 CSNK2BP67870 215 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 RNPS1Q15287 305 aaKnown RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 AAED1Q7RTV5 226 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ADAD1Q96M93 576 aaKnown RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 KCNK17Q96T54 332 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 YTHDF1Q9BYJ9 559 aaKnown RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 BLOC1S6Q9UL45 172 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.89□□□□□ -0.35
NPC1-207ENST00000588867 TPRKBQ9Y3C4 175 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
NPC1-207ENST00000588867 M0R3G1 203 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 GPR171O14626 319 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 AKAP8O43823 692 aaKnown RBP12.88□□□□□ -0.35
NPC1-207ENST00000588867 SLC16A7O60669 478 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 CCDC159P0C7I6 412 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 FCGR2AP12318 317 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 SPI1P17947 270 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 CENPAP49450 140 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 SELENOPP49908 381 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 RPTNQ6XPR3 784 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 RBP7Q96R05 134 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 TEAD3Q99594 435 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
NPC1-207ENST00000588867 EMC3Q9P0I2 261 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 NOSIPQ9Y314 301 aaKnown RBP12.88□□□□□ -0.35
NPC1-207ENST00000588867 DCTN6O00399 190 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 PGA4P0DJD7 388 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 PGA3P0DJD8 388 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 DBTP11182 482 aaKnown RBP12.88□□□□□ -0.35
NPC1-207ENST00000588867 PYCR1P32322 319 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 NTF4P34130 210 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 ZNF91Q05481 1191 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 FMODQ06828 376 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 LGALS3BPQ08380 585 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPC1-207ENST00000588867 AHSA2Q719I0 299 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 OR6V1Q8N148 313 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 PROKR2Q8NFJ6 384 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 OR6K6Q8NGW6 343 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 OR6N1Q8NGY5 312 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 OR2T4Q8NH00 348 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 FAM57AQ8TBR7 257 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 ZNRF4Q8WWF5 429 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 SGCDQ92629 289 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 GGHQ92820 318 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 MRPL13Q9BYD1 178 aaKnown RBP12.88□□□□□ -0.35
NPC1-207ENST00000588867 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
NPC1-207ENST00000588867 ATRXP46100 2492 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 IGKV3D-15A0A087WSY6 115 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 MAGEA13PA6NCF6 341 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
NPC1-207ENST00000588867 APOL3O95236 402 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 YES1P07947 543 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 GABRA1P14867 456 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 SLC2A5P22732 501 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 HTR1FP30939 366 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 MTNR1AP48039 350 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 SLC25A1P53007 311 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 CDH15P55291 814 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 PIGFQ07326 219 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 ETFDHQ16134 617 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
NPC1-207ENST00000588867 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.87□□□□□ -0.35
NPC1-207ENST00000588867 NOXO1Q8NFA2 376 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 WBP1Q96G27 269 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 RNF122Q9H9V4 155 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 PSORS1C1Q9UIG5 152 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 ITPR1Q14643 2758 aa12.87□□□□□ -0.35
NPC1-207ENST00000588867 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 PRRG2O14669 202 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 WDR1O75083 606 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 ZNF432O94892 652 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CTLA4P16410 223 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CSNK1A1P48729 337 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
NPC1-207ENST00000588867 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms