RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 EGR1P18146 543 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 CDH12P55289 794 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 CDK6Q00534 326 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 PMS2P3Q13401 168 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 OR1Q1Q15612 314 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 GCNT6Q5T4J0 391 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 SWT1Q5T5J6 900 aaKnown RBP15.74■□□□□ 0.11
CCDC43-204ENST00000588687 REP15Q6BDI9 236 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 REEP3Q6NUK4 255 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 GOLGA6L1Q8N7Z2 621 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 OR6N1Q8NGY5 312 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 TSPAN32Q96QS1 320 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 EPYCQ99645 322 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF416Q9BWM5 594 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 FBXL3Q9UKT7 428 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 WNK2Q9Y3S1 2297 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-204ENST00000588687 RGS9O75916 674 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-204ENST00000588687 CLPTM1O96005 669 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 PNPP00491 289 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 CSNK1A1P48729 337 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-204ENST00000588687 GALK2Q01415 458 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 GKAP1Q5VSY0 366 aaPredicted RBP15.73■□□□□ 0.11
CCDC43-204ENST00000588687 LINC00114Q6XXX2 140 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 PIWIL3Q7Z3Z3 882 aaKnown RBP15.73■□□□□ 0.11
CCDC43-204ENST00000588687 FAM216AQ8WUB2 273 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 VAPAQ9P0L0 249 aa15.73■□□□□ 0.11
CCDC43-204ENST00000588687 LOC105371242A0A075B767 164 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 A0A1W2PPW3 197 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 PPIHO43447 177 aaKnown RBP15.72■□□□□ 0.11
CCDC43-204ENST00000588687 SERPINI2O75830 405 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 LYPD3O95274 346 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF250P15622 560 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 EPHA1P21709 976 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 SLC18A1P54219 525 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 BIDP55957 195 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ERVS71-1P61550 626 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 NCALDP61601 193 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ACTG1P63261 375 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 PAGE3Q5JUK9 113 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 LRFN4Q6PJG9 635 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 THSD4Q6ZMP0 1018 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 SNX32Q86XE0 403 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 SLC22A24Q8N4F4 322 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 OR5J2Q8NH18 312 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 OR6X1Q8NH79 312 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF418Q8TF45 676 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-204ENST00000588687 SPATA5L1Q9BVQ7 753 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 TMPRSS13Q9BYE2 586 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 PARD6BQ9BYG5 372 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM38AQ9H6F2 299 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF665Q9H7R5 613 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 TCF7L2Q9NQB0 619 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM38BQ9NVV0 291 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 DUSP13Q9UII6 198 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF346Q9UL40 294 aaKnown RBP15.72■□□□□ 0.11
CCDC43-204ENST00000588687 CMYA5Q8N3K9 4069 aa15.72■□□□□ 0.11
CCDC43-204ENST00000588687 ZNF726A6NNF4 738 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 C17orf100A8MU93 164 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 MT-ATP6P00846 226 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 THY1P04216 161 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 NPTX1Q15818 432 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 ALKBH6Q3KRA9 238 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 RGS7BPQ6MZT1 257 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-204ENST00000588687 SHQ1Q6PI26 577 aaKnown RBP15.71■□□□□ 0.11
CCDC43-204ENST00000588687 BLOC1S3Q6QNY0 202 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 EPGNQ6UW88 154 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 TSPYL5Q86VY4 417 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-204ENST00000588687 KRT73Q86Y46 540 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 GTF3AQ92664 365 aaKnown RBP15.71■□□□□ 0.11
CCDC43-204ENST00000588687 ZMYND19Q96E35 227 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM27Q9HBJ8 222 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 TAS2R5Q9NYW4 299 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 GLTPQ9NZD2 209 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 PCDHB10Q9UN67 800 aa15.71■□□□□ 0.11
CCDC43-204ENST00000588687 TANC2Q9HCD6 1990 aa15.71■□□□□ 0.1
CCDC43-204ENST00000588687 MFN2O95140 757 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 SNAP29O95721 258 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 FAM157BP0CG42 384 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 PGA4P0DJD7 388 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 PGA3P0DJD8 388 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 ADORA3P0DMS8 318 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 CCL2P13500 99 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 GPX2P18283 190 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 AHCYP23526 432 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 AQP1P29972 269 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 PCBP3P57721 371 aaKnown RBP15.7■□□□□ 0.1
CCDC43-204ENST00000588687 CCL8P80075 99 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 MYBPC1Q00872 1141 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 SCGB2A2Q13296 93 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 SCARB2Q14108 478 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 ZNF74Q16587 644 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 NKPD1Q17RQ9 610 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 TMEM255AQ5JRV8 349 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 AVPI1Q5T686 147 aa15.7■□□□□ 0.1
CCDC43-204ENST00000588687 FAHD2BQ6P2I3 314 aaPredicted RBP15.7■□□□□ 0.1
CCDC43-204ENST00000588687 C1QL2Q7Z5L3 287 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms