RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FAM122AQ96E09 287 aa23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 NUAK2Q9H093 628 aa23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 MOKQ9UQ07 419 aa23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 ERGIC3Q9Y282 383 aa23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 EXOSC1Q9Y3B2 195 aaKnown RBP23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 CEPT1Q9Y6K0 416 aa23.23■■□□□ 1.31
SCAMP4-210ENST00000588555 SPENQ96T58 3664 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 K7EM74 188 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 EIF1AXP47813 144 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 POU4F2Q12837 409 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ZNF169Q14929 603 aaPredicted RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 LCN1P1Q5VSP4 162 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ZBTB46Q86UZ6 589 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 PROKR2Q8NFJ6 384 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 OR2T4Q8NH00 348 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ZHX1-C8orf76Q96EF9 292 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 OR5M11Q96RB7 305 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ALG12Q9BV10 488 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 DEFB127Q9H1M4 99 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 TSPAN10Q9H1Z9 355 aaPredicted RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 SRA1Q9HD15 236 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 KLHL13Q9P2N7 655 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ATMQ13315 3056 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 DNAJC13O75165 2243 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 H3BSA7 217 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 MRPL3P09001 348 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ZNF43P17038 809 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 BIDP55957 195 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 BCL2A1Q16548 175 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 Q6ZS92 163 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 ABTB1Q969K4 478 aaPredicted RBP23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 EMC6Q9BV81 110 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 FKBP7Q9Y680 259 aa23.22■■□□□ 1.31
SCAMP4-210ENST00000588555 FAM171A2A8MVW0 826 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 MKRN2OSH3BPM6 223 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 TRMUO75648 421 aaKnown RBP23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 ACTL6AO96019 429 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 ZNF24P17028 368 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 MYL12AP19105 171 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 PSMB9P28065 219 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 PLA2G5P39877 138 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 C1DQ13901 141 aaKnown RBP23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 SLC17A1Q14916 467 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 VASNQ6EMK4 673 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 LYPD4Q6UWN0 246 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 ZNF367Q7RTV3 350 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 POMGNT2Q8NAT1 580 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 OR6K6Q8NGW6 343 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 MND1Q9BWT6 205 aa23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 MRPL13Q9BYD1 178 aaKnown RBP23.21■■□□□ 1.31
SCAMP4-210ENST00000588555 TMEM129A0AVI4 362 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 TBR1Q16650 682 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 ERVK13-1Q9NX77 482 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 B9D1Q9UPM9 204 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 PCDHGB7Q9Y5F8 929 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 CHD8Q9HCK8 2581 aa23.2■■□□□ 1.3
SCAMP4-210ENST00000588555 IGLV1-36A0A0B4J1U3 117 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 TRGV5A0A0B4J1U4 118 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 C12orf71A8MTZ7 269 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 TFECO14948 347 aaPredicted RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 TFP02787 698 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 CTLA4P16410 223 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 TMPRSS3P57727 454 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 PDSS1Q5T2R2 415 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 ABLIM2Q6H8Q1 611 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 LRRC69Q6ZNQ3 347 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 CREB3L2Q70SY1 520 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 LHFPL3Q86UP9 236 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 ACBD7Q8N6N7 88 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 RBMXL3Q8N7X1 1067 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SYT14Q8NB59 555 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 OR9K2Q8NGE7 335 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 OR6X1Q8NH79 312 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 CPNE4Q96A23 557 aaPredicted RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF845Q96IR2 970 aaPredicted RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 COG8Q96MW5 612 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 CNN2Q99439 309 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SLC35F4A4IF30 521 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 MYL12BO14950 172 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 AHCYL1O43865 530 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 IGHG3P01860 377 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 UCNP55089 124 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF485Q8NCK3 441 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SMAP2Q8WU79 429 aaPredicted RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SF3B5Q9BWJ5 86 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 TIGARQ9NQ88 270 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SPRR3Q9UBC9 169 aa23.19■■□□□ 1.3
SCAMP4-210ENST00000588555 SLC16A7O60669 478 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 PGA4P0DJD7 388 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 PGA3P0DJD8 388 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 MED22Q15528 200 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 TIGD6Q17RP2 521 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF511Q8NB15 262 aa23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 NMD3Q96D46 503 aaKnown RBP23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 SLC25A44Q96H78 314 aaPredicted RBP23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 CHCHD3Q9NX63 227 aaKnown RBP23.18■■□□□ 1.3
SCAMP4-210ENST00000588555 ZNF716A6NP11 495 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 SELENOFO60613 162 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 CD79BP40259 229 aa23.17■■□□□ 1.3
SCAMP4-210ENST00000588555 NAA10P41227 235 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms