RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 TMEM239Q8WW34 195 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 TMEM54Q969K7 222 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 SGTBQ96EQ0 304 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 TPD52L3Q96J77 140 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 VRK1Q99986 396 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-219ENST00000588411 PLK3Q9H4B4 646 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 MYOZ1Q9NP98 299 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-219ENST00000588411 B3GNT2Q9NY97 397 aa18.91■□□□□ 0.62
CIRBP-219ENST00000588411 ZNF503-AS2A6NEH8 195 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 MCIDASD6RGH6 385 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 BLOC1S5-TXNDC5H3BN57 136 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 FARS2O95363 451 aaKnown RBP18.9■□□□□ 0.62
CIRBP-219ENST00000588411 IGHG1P01857 330 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 TNFRSF1BP20333 461 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 NPR2P20594 1047 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 LSP1P33241 339 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 OR1E2P47887 323 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 PDLIM4P50479 330 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 HGFACQ04756 655 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 DAG1Q14118 895 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 MYPOPQ86VE0 399 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-219ENST00000588411 POU5F2Q8N7G0 328 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 C10orf105Q8TEF2 133 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 RAB1BQ9H0U4 201 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 MEPEQ9NQ76 525 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-219ENST00000588411 STX18Q9P2W9 335 aaKnown RBP18.9■□□□□ 0.62
CIRBP-219ENST00000588411 MED31Q9Y3C7 131 aa18.9■□□□□ 0.62
CIRBP-219ENST00000588411 NDUFS8O00217 210 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 SHOX2O60902 331 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 OR7A10O76100 309 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 FUT1P19526 365 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 THBS4P35443 961 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 PTDSS1P48651 473 aaKnown RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 PPOXP50336 477 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 DAP3P51398 398 aaKnown RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 CLRN1P58418 232 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 PIGFQ07326 219 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 LOXL1Q08397 574 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 SNTB2Q13425 540 aaKnown RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 PIN1Q13526 163 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-219ENST00000588411 MELKQ14680 651 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 NKAIN4Q8IVV8 208 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 TMEM255BQ8WV15 326 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 SORCS2Q96PQ0 1159 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 TNFRSF13CQ96RJ3 184 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 NOX3Q9HBY0 568 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 YAE1D1Q9NRH1 226 aa18.89■□□□□ 0.61
CIRBP-219ENST00000588411 HTR3EA5X5Y0 456 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 CENPBD1B2RD01 187 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 hCG_2039718K7EN88 272 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 NDUFAB1O14561 156 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 OR8G3PP0DMU2 310 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 COX4I1P13073 169 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 GIPRP48546 466 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 UGT2B15P54855 530 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 RAB1AP62820 205 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 SELENOWP63302 87 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 GALK2Q01415 458 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 RPL18Q07020 188 aaKnown RBP18.88■□□□□ 0.61
CIRBP-219ENST00000588411 ST3GAL3Q11203 375 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 SPATA21Q7Z572 469 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 DPPA2Q7Z7J5 298 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 WDFY1Q8IWB7 410 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 PFN4Q8NHR9 129 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 PRRC1Q96M27 445 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 HOPXQ9BPY8 73 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-219ENST00000588411 PIMREGQ9BSJ6 248 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 EFCAB1Q9HAE3 211 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 DYNLRB1Q9NP97 96 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 INIPQ9NRY2 104 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 CMAHPQ9Y471 501 aa18.88■□□□□ 0.61
CIRBP-219ENST00000588411 GSTA4O15217 222 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 DHHO43323 396 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 CRLF1O75462 422 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 ABCA1O95477 2261 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 PGA4P0DJD7 388 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 PGA3P0DJD8 388 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 NR4A1P22736 598 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 RPS23P62266 143 aaKnown RBP18.87■□□□□ 0.61
CIRBP-219ENST00000588411 TMEM249Q2WGJ8 235 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 GKAP1Q5VSY0 366 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-219ENST00000588411 KRT80Q6KB66 452 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 SLC22A24Q8N4F4 322 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 TMEM38BQ9NVV0 291 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 CMTM6Q9NX76 183 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 JMJD1CQ15652 2540 aa18.87■□□□□ 0.61
CIRBP-219ENST00000588411 LOC390937A0A1W2PQ73 354 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 LY6HO94772 140 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 IFNW1P05000 195 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 QDPRP09417 244 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 ZNF14P17017 642 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-219ENST00000588411 USF1P22415 310 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-219ENST00000588411 ZNF84P51523 738 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 LIPEQ05469 1076 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 CARTPTQ16568 116 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 SLC15A3Q8IY34 581 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 SVOPLQ8N434 492 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 ANKS4BQ8N8V4 417 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 LIPHQ8WWY8 451 aa18.86■□□□□ 0.61
CIRBP-219ENST00000588411 MS4A3Q96HJ5 214 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms