RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 RAB39AQ14964 217 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 REP15Q6BDI9 236 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF613Q6PF04 617 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 GLCCI1Q86VQ1 547 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 LRP11Q86VZ4 500 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF584Q8IVC4 421 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 SMYD1Q8NB12 490 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 RDH5Q92781 318 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 CPPED1Q9BRF8 314 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-216ENST00000586813 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 SLC7A8Q9UHI5 535 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 C11orf98E9PRG8 122 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 CHP2O43745 196 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 FMO6PO60774 539 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 PATE4P0C8F1 98 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 ADORA3P0DMS8 318 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 SAGP10523 405 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-216ENST00000586813 ACHEP22303 614 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 PCBP3P57721 371 aaKnown RBP16.61■□□□□ 0.25
TRAF4-216ENST00000586813 LINC00114Q6XXX2 140 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 WDR88Q6ZMY6 472 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 PIWIL3Q7Z3Z3 882 aaKnown RBP16.61■□□□□ 0.25
TRAF4-216ENST00000586813 CARM1Q86X55 608 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 MEX3DQ86XN8 651 aaKnown RBP16.61■□□□□ 0.25
TRAF4-216ENST00000586813 SKA3Q8IX90 412 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 CLDND2Q8NHS1 167 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 TMEM54Q969K7 222 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 MCHR1Q99705 422 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 CCDC28BQ9BUN5 200 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 RACGAP1Q9H0H5 632 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 NARFLQ9H6Q4 476 aa16.61■□□□□ 0.25
TRAF4-216ENST00000586813 A0A1W2PPW3 197 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-216ENST00000586813 OR6A2O95222 327 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 SERPINA5P05154 406 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 COL8A2P25067 703 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 LSP1P33241 339 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 AGKQ53H12 422 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 SLC35D2Q76EJ3 337 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 PTOV1Q86YD1 416 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 OR6X1Q8NH79 312 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 FGFBP3Q8TAT2 258 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 YIPF5Q969M3 257 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 ARHGDIGQ99819 225 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF275Q9NSD4 429 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-216ENST00000586813 GLTPQ9NZD2 209 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 DUSP13Q9UII6 198 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 METRNQ9UJH8 293 aa16.6■□□□□ 0.25
TRAF4-216ENST00000586813 FAM157AC9JC47 383 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 NCR1O76036 304 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 TFP02787 698 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 OPN1SWP03999 348 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 NAT2P11245 290 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 ATP4BP51164 291 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 MRPS11P82912 194 aaKnown RBP16.59■□□□□ 0.25
TRAF4-216ENST00000586813 NPTX1Q15818 432 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF74Q16587 644 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 DLEU7Q6UYE1 221 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 SLC22A24Q8N4F4 322 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 C11orf65Q8NCR3 313 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 GPR32P1Q8NGA4 272 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 OR6T1Q8NGN1 323 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 LRRC8CQ8TDW0 803 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF566Q969W8 418 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 TMEM186Q96B77 213 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF385DQ9H6B1 395 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 METTL17Q9H7H0 456 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-216ENST00000586813 LPAR2Q9HBW0 351 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 TMEM38BQ9NVV0 291 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 HIF1ANQ9NWT6 349 aa16.59■□□□□ 0.25
TRAF4-216ENST00000586813 ZNF346Q9UL40 294 aaKnown RBP16.59■□□□□ 0.25
TRAF4-216ENST00000586813 CPSF4LA6NMK7 179 aaKnown RBP16.58■□□□□ 0.24
TRAF4-216ENST00000586813 WNT9BO14905 357 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 ENTPD5O75356 428 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 RP2O75695 350 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 MSMBP08118 114 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 OR8G3PP0DMU2 310 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 ZP4Q12836 540 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 MELKQ14680 651 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 DUSP7Q16829 419 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 CYP51A1Q16850 503 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 ENTPD8Q5MY95 495 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 RGS7BPQ6MZT1 257 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-216ENST00000586813 DEF8Q6ZN54 512 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-216ENST00000586813 SLC30A7Q8NEW0 376 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF416Q9BWM5 594 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 OCEL1Q9H607 264 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 TAS2R5Q9NYW4 299 aa16.58■□□□□ 0.24
TRAF4-216ENST00000586813 PPIHO43447 177 aaKnown RBP16.57■□□□□ 0.24
TRAF4-216ENST00000586813 RNF13O43567 381 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 ERLIN1O75477 346 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 LYPD3O95274 346 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 CH25HO95992 272 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 THY1P04216 161 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 FAM157BP0CG42 384 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 PGA4P0DJD7 388 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 PGA3P0DJD8 388 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 GAAP10253 952 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms