RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 UBA52P62987 128 aaKnown RBP10.12□□□□□ -0.79
BRCA1-225ENST00000586385 PUDPQ08623 228 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 KRT71Q3SY84 523 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 REP15Q6BDI9 236 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ACSM5Q6NUN0 579 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 DHRS4L2Q6PKH6 230 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 SLC2A7Q6PXP3 512 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 MSANTD1Q6ZTZ1 278 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 BBS10Q8TAM1 723 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 DNAJA4Q8WW22 397 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-225ENST00000586385 DVL3Q92997 716 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ITCHQ96J02 903 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ARMC7Q9H6L4 198 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 THUMPD1Q9NXG2 353 aaKnown RBP10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ZIM2Q9NZV7 527 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 RPS6KB2Q9UBS0 482 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 SLC7A8Q9UHI5 535 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 PCDHGB1Q9Y5G3 927 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 CORINQ9Y5Q5 1042 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 CLIC1O00299 241 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 UBL3O95164 117 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 ANP32DO95626 131 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 ARAFP10398 606 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 KITP10721 976 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 NQO1P15559 274 aaKnown RBP10.11□□□□□ -0.79
BRCA1-225ENST00000586385 RBMXP38159 391 aaKnown RBP10.11□□□□□ -0.79
BRCA1-225ENST00000586385 CRYBB2P43320 205 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 LIMS1P48059 325 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 CSNK1A1P48729 337 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 BIDP55957 195 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 GALK2Q01415 458 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 SCGB2A2Q13296 93 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 PMS2P3Q13401 168 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 OR1Q1Q15612 314 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 NKPD1Q17RQ9 610 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 C6orf10Q5SRN2 563 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 RGS7BPQ6MZT1 257 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-225ENST00000586385 ULK3Q6PHR2 472 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 PXKQ7Z7A4 578 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 KIRREL3Q8IZU9 778 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 SLC30A7Q8NEW0 376 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 OR6N1Q8NGY5 312 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 NFKBIDQ8NI38 313 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 C22orf15Q8WYQ4 148 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 OR52B2Q96RD2 323 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 SH3GL3Q99963 347 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF747Q9BV97 191 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 C1QTNF5Q9BXJ0 243 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 OR51B6Q9H340 312 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 B3GAT2Q9NPZ5 323 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 TCF7L2Q9NQB0 619 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 TMEM38BQ9NVV0 291 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 NKIRAS2Q9NYR9 191 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF346Q9UL40 294 aaKnown RBP10.11□□□□□ -0.79
BRCA1-225ENST00000586385 WIPI2Q9Y4P8 454 aa10.11□□□□□ -0.79
BRCA1-225ENST00000586385 A0A0G2JMP0 313 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 A0A0X1KG70 313 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SERPINI2O75830 405 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 LYPD3O95274 346 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 POLR2JP52435 117 aaKnown RBP10.1□□□□□ -0.79
BRCA1-225ENST00000586385 CDH12P55289 794 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 FADDQ13158 208 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SPRNQ5BIV9 151 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 USP51Q70EK9 711 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 PIWIL3Q7Z3Z3 882 aaKnown RBP10.1□□□□□ -0.79
BRCA1-225ENST00000586385 TSPYL5Q86VY4 417 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-225ENST00000586385 MIER2Q8N344 545 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SLC22A24Q8N4F4 322 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 MREGQ8N565 214 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 OR4M2Q8NGB6 313 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 LRRC58Q96CX6 371 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SLC47A1Q96FL8 570 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 C1orf147Q96MC9 270 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SUCNR1Q9BXA5 334 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 ASPNQ9BXN1 380 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 IKZF5Q9H5V7 419 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF696Q9H7X3 374 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 RMND5AQ9H871 391 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SLC52A3Q9NQ40 469 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 GLTPQ9NZD2 209 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 SLAMF8Q9P0V8 285 aa10.1□□□□□ -0.79
BRCA1-225ENST00000586385 TESQ9UGI8 421 aaKnown RBP10.1□□□□□ -0.79
BRCA1-225ENST00000586385 TRBV5-3A0A0A0MS03 114 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 IGHV1-69-2A0A0G2JMI3 117 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 TRPC5OSA6NMA1 111 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF726A6NNF4 738 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 C11orf98E9PRG8 122 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 J3QLI3 93 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 RGS16O15492 202 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 PRSS23O95084 383 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 THY1P04216 161 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 MMP7P09237 267 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 HKR1P10072 659 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 MAKP20794 623 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 AHCYP23526 432 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 ZFP36P26651 326 aaKnown RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 KLF3P57682 345 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 GLO1Q04760 184 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms