RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RAP2AP10114 183 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 ACADSP16219 412 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 AQP2P41181 271 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 LIMS1P48059 325 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF84P51523 738 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 HMGA2P52926 109 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 CLRN1P58418 232 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 KEAP1Q14145 624 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 HIST3H3Q16695 136 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 PODNL1Q6PEZ8 512 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 LURAP1LQ8IV03 231 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 IL17RDQ8NFM7 739 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 OR4K5Q8NGD3 323 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 CANT1Q8WVQ1 401 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 BCL2L2Q92843 193 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 FOXB1Q99853 325 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 FUZQ9BT04 418 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 GRIP2Q9C0E4 1043 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 DHRS12A0PJE2 317 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 M0R3G1 203 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 SERPINI2O75830 405 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 UBL3O95164 117 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 IGKV3-15P01624 115 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 MAKP20794 623 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 FPR3P25089 353 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 CD40P25942 277 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 RRM2P31350 389 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 ARR3P36575 388 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 OMPP47874 163 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 RPL27P61353 136 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 CAMK2DQ13557 499 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 C10orf128Q5T292 105 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 ARMC4Q5T2S8 1044 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 TBPL2Q6SJ96 375 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 OR52J3Q8NH60 311 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 TXNDC15Q96J42 360 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 KCNS3Q9BQ31 491 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 WACQ9BTA9 647 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 EMC6Q9BV81 110 aa12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 FBXO9Q9UK97 447 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-202ENST00000585540 DHHO43323 396 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 OR10H3O60404 316 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 ATE1O95260 518 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 F13BP05160 661 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 CD14P08571 375 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 NPR2P20594 1047 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 RPS6KA3P51812 740 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 CTXN1P60606 82 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 ARF1P84077 181 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 BSPH1Q075Z2 132 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 MELKQ14680 651 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 SEC23BQ15437 767 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF672Q499Z4 452 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 THEM4Q5T1C6 240 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 C9orf135Q5VTT2 229 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF544Q6NX49 715 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 ZNF813Q6ZN06 617 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 LINGO2Q7L985 606 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 LRRC75AQ8NAA5 344 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 GTPBP3Q969Y2 492 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 RSRC1Q96IZ7 334 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 SLC38A2Q96QD8 506 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 RBP7Q96R05 134 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 CXXC4Q9H2H0 198 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 C1orf198Q9H425 327 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 CXorf56Q9H5V9 222 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 REEP1Q9H902 201 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 SIGLEC7Q9Y286 467 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 LYVE1Q9Y5Y7 322 aa12.08□□□□□ -0.48
PRKCSH-202ENST00000585540 CRYBG3Q68DQ2 2970 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ITPR2Q14571 2701 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 A0A1W2PPR1 153 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 DPRXA6NFQ7 191 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 XKRYO14609 159 aa12.07□□□□□ -0.48
PRKCSH-202ENST00000585540 ABCD4O14678 606 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms