RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EPYCQ99645 322 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 TMEM43Q9BTV4 400 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 SPATA5L1Q9BVQ7 753 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 ULBP2Q9BZM5 246 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 TMEM27Q9HBJ8 222 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 SLC52A3Q9NQ40 469 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 G6PC2Q9NQR9 355 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 PCDHB10Q9UN67 800 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 LRRN3E7EW58 273 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
SDF2-202ENST00000585428 RAB36O95755 333 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 ANPEPP15144 967 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 ZNF250P15622 560 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 AHCYP23526 432 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 ARFIP2P53365 341 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 CDH12P55289 794 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 HILS1P60008 231 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 CDK6Q00534 326 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 SCGB2A2Q13296 93 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 PEG10Q86TG7 708 aaKnown RBP12.37□□□□□ -0.43
SDF2-202ENST00000585428 KRT73Q86Y46 540 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 FUNDC1Q8IVP5 155 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 OR6X1Q8NH79 312 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
SDF2-202ENST00000585428 ZNF416Q9BWM5 594 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 TAS2R5Q9NYW4 299 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 TESQ9UGI8 421 aaKnown RBP12.37□□□□□ -0.43
SDF2-202ENST00000585428 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
SDF2-202ENST00000585428 ZNF346Q9UL40 294 aaKnown RBP12.37□□□□□ -0.43
SDF2-202ENST00000585428 IGLV3-9A0A075B6K5 115 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 CLPTM1O96005 669 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 MT-ATP6P00846 226 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 OR8G3PP0DMU2 310 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 GPX2P18283 190 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 CRYBB2P43320 205 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 MAGEB1P43366 347 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 BIDP55957 195 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 ZP4Q12836 540 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 MMEL1Q495T6 779 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
SDF2-202ENST00000585428 ACSM5Q6NUN0 579 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 OR5J2Q8NH18 312 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 MGARPQ8TDB4 240 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 GCDHQ92947 438 aaPredicted RBP12.36□□□□□ -0.43
SDF2-202ENST00000585428 TMEM38AQ9H6F2 299 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 EVA1AQ9H8M9 152 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 HINT3Q9NQE9 182 aaKnown RBP12.36□□□□□ -0.43
SDF2-202ENST00000585428 NKIRAS2Q9NYR9 191 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 SELENONQ9NZV5 590 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 VAPAQ9P0L0 249 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 TAAR3PQ9P1P4 343 aa12.36□□□□□ -0.43
SDF2-202ENST00000585428 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PRORSD1PA6NEY8 169 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PLPP2O43688 288 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 DEAF1O75398 565 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 MFN2O95140 757 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PNPP00491 289 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 CSNK1A1P48729 337 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PRSS12P56730 875 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 CCL8P80075 99 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PAGE3Q5JUK9 113 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 RGS7BPQ6MZT1 257 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 CROCCP2Q86T23 111 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 C3orf56Q8N813 242 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 RNF217Q8TC41 542 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 ZNF607Q96SK3 696 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 SH3GL3Q99963 347 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.35□□□□□ -0.43
SDF2-202ENST00000585428 RAB21Q9UL25 225 aa12.35□□□□□ -0.43
SDF2-202ENST00000585428 V9GYY5 206 aaPredicted RBP12.35□□□□□ -0.43
SDF2-202ENST00000585428 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 FMO6PO60774 539 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 SERPINB7O75635 380 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 ADORA3P0DMS8 318 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 EPHA1P21709 976 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 PPIBP23284 216 aaKnown RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 SLC6A2P23975 617 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 UCP2P55851 309 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 RGS8P57771 180 aaPredicted RBP12.34□□□□□ -0.43
SDF2-202ENST00000585428 SELENOVP59797 346 aa12.34□□□□□ -0.43
SDF2-202ENST00000585428 HIST3H3Q16695 136 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms