RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR2G2Q8NGZ5 317 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CCDC120Q96HB5 630 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 NUP210LQ5VU65 1888 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PRKNO60260 465 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 NSA2O95478 260 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MAS1P04201 325 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ALOX5APP20292 161 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CCR4P51679 360 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 RPL18Q07020 188 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 HTR4Q13639 388 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MESTQ5EB52 335 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 NHLRC3Q5JS37 347 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GLB1L2Q8IW92 636 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SFXN2Q96NB2 322 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MNTQ99583 582 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 WDR76Q9H967 626 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 EXOSC3Q9NQT5 275 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PRODH2Q9UF12 536 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SPTBP11277 2137 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TMEM212A6NML5 194 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 H7C1C5 153 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 H7C417 338 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 HRGP04196 525 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 HPGDP15428 266 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 HSD17B7P56937 341 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 LCN6P62502 163 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 EGR3Q06889 387 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PHOSPHO1Q8TCT1 267 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ELMOD3Q96FG2 381 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TSPAN32Q96QS1 320 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 COMMD4Q9H0A8 199 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 STEAP1Q9UHE8 339 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SPEF1Q9Y4P9 236 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 C10orf142B7Z368 130 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PRAMEF26H0Y7S4 382 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PYCARD-AS1I3L0S3 204 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SCO1O75880 301 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 RBBP9O75884 186 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 AKR7A3O95154 331 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SEMA4FO95754 770 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GRM7Q14831 915 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CSRP2Q16527 193 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ADGRG3Q86Y34 549 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF676Q8N7Q3 588 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR10AC1Q8NH08 325 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MCHR2Q969V1 340 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KTI12Q96EK9 354 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MSANTD3Q96H12 275 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KIF25Q9UIL4 384 aa12.88□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SPTY2D1-AS1A0A0U1RR47 76 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 L7N2F9 121 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CDK2AP1O14519 115 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF264O43296 627 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CFPP27918 469 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 FAUP35544 74 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PBX2P40425 430 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 DMWDQ09019 674 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 RBMS2Q15434 407 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ANKRD16Q6P6B7 361 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 NUP54Q7Z3B4 507 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OMA1Q96E52 524 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TMEM14AQ9Y6G1 99 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 H0YC42 278 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SCDO00767 359 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 IL33O95760 270 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GABRG2P18507 467 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GALNSP34059 522 aa12.87□□□□□ -0.35
CDK5RAP3-237ENST00000585163 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms