RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ERICH4A6NGS2 130 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 B9A039 149 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 OR7A10O76100 309 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 RAB36O95755 333 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 IGF2P01344 180 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
SS18-225ENST00000585121 FUT1P19526 365 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 CLRN1P58418 232 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 GSG1Q2KHT4 349 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 KRTAP21-3Q3LHN1 58 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 ZNF627Q7L945 461 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 TRPM8Q7Z2W7 1104 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 PIWIL3Q7Z3Z3 882 aaKnown RBP10.76□□□□□ -0.69
SS18-225ENST00000585121 MDP1Q86V88 176 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 NKAIN4Q8IVV8 208 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 SLC15A3Q8IY34 581 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 TMEM255BQ8WV15 326 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 SLC25A44Q96H78 314 aaPredicted RBP10.76□□□□□ -0.69
SS18-225ENST00000585121 LRRC37BQ96QE4 947 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 STX18Q9P2W9 335 aaKnown RBP10.76□□□□□ -0.69
SS18-225ENST00000585121 FBXL3Q9UKT7 428 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 FKBP7Q9Y680 259 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 ALPK2Q86TB3 2170 aa10.76□□□□□ -0.69
SS18-225ENST00000585121 HTR3EA5X5Y0 456 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 CXCR6O00574 342 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 PDE5AO76074 875 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 UBL3O95164 117 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 FARS2O95363 451 aaKnown RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 ZNF682O95780 498 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 IGHG1P01857 330 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 HLA-HP01893 362 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 IFNW1P05000 195 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 CSF3P09919 207 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 OR4A8P0C604 315 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 B4GALT1P15291 398 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 CALCRP30988 508 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 NUDT2P50583 147 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 DAP3P51398 398 aaKnown RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 SLC7A2P52569 658 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 EFNA4P52798 201 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 UGT2B15P54855 530 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 MELKQ14680 651 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 HACD2Q6Y1H2 254 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 FKBP9P1Q75LS8 142 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 SLC46A3Q7Z3Q1 461 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 PFN4Q8NHR9 129 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 GEMIN6Q8WXD5 167 aaKnown RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 PRRC1Q96M27 445 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 KCTD14Q9BQ13 255 aaPredicted RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 FNDC11Q9BVV2 318 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 MEPEQ9NQ76 525 aaPredicted RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 INIPQ9NRY2 104 aa10.75□□□□□ -0.69
SS18-225ENST00000585121 NSD1Q96L73 2696 aaPredicted RBP10.75□□□□□ -0.69
SS18-225ENST00000585121 IGHV2OR16-5A0A0B4J2B6 119 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 GMNNO75496 209 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 ERCC1P07992 297 aaPredicted RBP10.74□□□□□ -0.69
SS18-225ENST00000585121 CELA3BP08861 270 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 ZNF84P51523 738 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 RAB1AP62820 205 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 RPL18Q07020 188 aaKnown RBP10.74□□□□□ -0.69
SS18-225ENST00000585121 PIGFQ07326 219 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 DAG1Q14118 895 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 DNM1P46Q6ZS02 220 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 FAM168AQ92567 244 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 FAM162AQ96A26 154 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 VRK1Q99986 396 aaPredicted RBP10.74□□□□□ -0.69
SS18-225ENST00000585121 ZNF442Q9H7R0 627 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 B3GNT2Q9NY97 397 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 ZANQ9Y493 2812 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 CENPBD1B2RD01 187 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 DHHO43323 396 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 F12P00748 615 aaPredicted RBP10.74□□□□□ -0.69
SS18-225ENST00000585121 F13BP05160 661 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 QDPRP09417 244 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 OR8G3PP0DMU2 310 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 NR2C1P13056 603 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 SLC25A16P16260 332 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 NPR2P20594 1047 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 PCSK6P29122 969 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 PRDX6P30041 224 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 AQP2P41181 271 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 PTDSS1P48651 473 aaKnown RBP10.74□□□□□ -0.69
SS18-225ENST00000585121 GSK3BP49841 420 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 GALK2Q01415 458 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 TRAM2Q15035 370 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 EFNB3Q15768 340 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 IFI44LQ53G44 452 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 CCDC121Q6ZUS5 278 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 VTCN1Q7Z7D3 282 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 CYP4Z1Q86W10 505 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 TREML1Q86YW5 311 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms