RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NPR2P20594 1047 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GIPRP48546 466 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 UGT2B15P54855 530 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RAB1AP62820 205 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZP4Q12836 540 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SNTB2Q13425 540 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 DAG1Q14118 895 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MICU2Q8IYU8 434 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SVOPLQ8N434 492 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 IL17RDQ8NFM7 739 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 C10orf105Q8TEF2 133 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 TMEM239Q8WW34 195 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 TMEM54Q969K7 222 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SGTBQ96EQ0 304 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SLC25A44Q96H78 314 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PLK3Q9H4B4 646 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CCDC134Q9H6E4 229 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 C20orf141Q9NUB4 165 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CMTM6Q9NX76 183 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GMPR2Q9P2T1 348 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-233ENST00000584186 A0A1W2PRG6 482 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MCIDASD6RGH6 385 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 hCG_2039718K7EN88 272 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SLC22A2O15244 555 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CRLF1O75462 422 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PDE5AO76074 875 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 OR7A10O76100 309 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 UBL3O95164 117 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PATE4P0C8F1 98 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 AQP2P41181 271 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RBM34P42696 430 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PDLIM4P50479 330 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CLRN1P58418 232 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 EFNB3Q15768 340 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 TMEM249Q2WGJ8 235 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GKAP1Q5VSY0 366 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZNF627Q7L945 461 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SLC22A24Q8N4F4 322 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RP9Q8TA86 221 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 TNFRSF13CQ96RJ3 184 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RAB1BQ9H0U4 201 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 POLR2J3Q9H1A7 115 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZNF442Q9H7R0 627 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 DYNLRB1Q9NP97 96 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MED31Q9Y3C7 131 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ANK3Q12955 4377 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-233ENST00000584186 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GSTA4O15217 222 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CCDC22O60826 627 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 IGHG1P01857 330 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 QDPRP09417 244 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PGA4P0DJD7 388 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PGA3P0DJD8 388 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 COX4I1P13073 169 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SELENOWP63302 87 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MYBPC1Q00872 1141 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GALK2Q01415 458 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 LIPEQ05469 1076 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RUNX1T1Q06455 604 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 LOXL1Q08397 574 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 RAB39AQ14964 217 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 LRFN4Q6PJG9 635 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PIWIL3Q7Z3Z3 882 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ARPINQ7Z6K5 226 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SYT14Q8NB59 555 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 MOSPD2Q8NHP6 518 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 PIMREGQ9BSJ6 248 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 INIPQ9NRY2 104 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ZNF224Q9NZL3 707 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 ADAM21Q9UKJ8 722 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 SPEF1Q9Y4P9 236 aa11.78□□□□□ -0.52
CDK5RAP3-233ENST00000584186 A0A096LNT2 108 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 A8MV72 311 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 DHHO43323 396 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 FARS2O95363 451 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 ZNF682O95780 498 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 THRBP10828 461 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 NR4A1P22736 598 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 IFNA8P32881 189 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 LSP1P33241 339 aa11.77□□□□□ -0.53
CDK5RAP3-233ENST00000584186 PPOXP50336 477 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms