RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	EVX1	P49640	407 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC18A1	P54219	525 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	RPS23	P62266	143 aa	Known RBP	13	□□□□□ -0.33
SREBF1-222	ENST00000583732	AGK	Q53H12	422 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	THSD4	Q6ZMP0	1018 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	PXK	Q7Z7A4	578 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	SNX32	Q86XE0	403 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	SKA3	Q8IX90	412 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	HIPK4	Q8NE63	616 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	RDH5	Q92781	318 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMEM43	Q9BTV4	400 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	MS4A5	Q9H3V2	200 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMBIM4	Q9HC24	238 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	ZNF275	Q9NSD4	429 aa	Predicted RBP	13	□□□□□ -0.33
SREBF1-222	ENST00000583732	TREM2	Q9NZC2	230 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	METRN	Q9UJH8	293 aa		13	□□□□□ -0.33
SREBF1-222	ENST00000583732	TRBV5-3	A0A0A0MS03	114 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	EVPLL	A8MZ36	301 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732		B4DSR2	109 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	PPIH	O43447	177 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	FAM157B	P0CG42	384 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	CCL2	P13500	99 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	PCMT1	P22061	227 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	ACHE	P22303	614 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	MRPL19	P49406	292 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	IDH3A	P50213	366 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	FXN	Q16595	210 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	NKPD1	Q17RQ9	610 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	UGT2A3	Q6UWM9	527 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	NHLRC1	Q6VVB1	395 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	C12orf54	Q6X4T0	127 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC35D2	Q76EJ3	337 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	ZNF627	Q7L945	461 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	ZNF584	Q8IVC4	421 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	SH3GL3	Q99963	347 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMEM38A	Q9H6F2	299 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLCO1B3	Q9NPD5	702 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	HIF1AN	Q9NWT6	349 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC7A8	Q9UHI5	535 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	CORO2B	Q9UQ03	480 aa		12.99	□□□□□ -0.33
SREBF1-222	ENST00000583732	RNF13	O43567	381 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	MFN2	O95140	757 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	VENTX	O95231	258 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	CH25H	O95992	272 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	CLPTM1	O96005	669 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	MT-ATP6	P00846	226 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	MAGEB1	P43366	347 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	NPTX1	Q15818	432 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	REP15	Q6BDI9	236 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	SHQ1	Q6PI26	577 aa	Known RBP	12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	WDR88	Q6ZMY6	472 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	MEX3D	Q86XN8	651 aa	Known RBP	12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC22A24	Q8N4F4	322 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMEM54	Q969K7	222 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMEM186	Q96B77	213 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	C7orf26	Q96N11	449 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	LRRC37B	Q96QE4	947 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	TSPAN32	Q96QS1	320 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	ARHGDIG	Q99819	225 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	RNF121	Q9H920	327 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC52A3	Q9NQ40	469 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	GLTP	Q9NZD2	209 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	TAAR3P	Q9P1P4	343 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	FBXL3	Q9UKT7	428 aa		12.98	□□□□□ -0.33
SREBF1-222	ENST00000583732	CHP2	O43745	196 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	CDC14B	O60729	498 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	MSMB	P08118	114 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	UMPS	P11172	480 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	GPX2	P18283	190 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	MTPN	P58546	118 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	ERVS71-1	P61550	626 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	SELPLG	Q14242	412 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	CYP51A1	Q16850	503 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	ENTPD8	Q5MY95	495 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	SWT1	Q5T5J6	900 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	AVPI1	Q5T686	147 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	ZNF613	Q6PF04	617 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	TTC33	Q6PID6	262 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	PTOV1	Q86YD1	416 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	RBM45	Q8IUH3	476 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	LRRC17	Q8N6Y2	441 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	ICA1L	Q8NDH6	482 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	SLC30A7	Q8NEW0	376 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	GPR32P1	Q8NGA4	272 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	OR6T1	Q8NGN1	323 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	LRRC8C	Q8TDW0	803 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	CCDC28B	Q9BUN5	200 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	CDH20	Q9HBT6	801 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	TMEM38B	Q9NVV0	291 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	ZNF346	Q9UL40	294 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	GRIP1	Q9Y3R0	1128 aa		12.97	□□□□□ -0.33
SREBF1-222	ENST00000583732	TGDS	O95455	350 aa		12.96	□□□□□ -0.33
SREBF1-222	ENST00000583732	TF	P02787	698 aa		12.96	□□□□□ -0.33
SREBF1-222	ENST00000583732	THY1	P04216	161 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms