RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ASB10Q8WXI3 467 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TMEM54Q969K7 222 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 GLTPQ9NZD2 209 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 PRPF19Q9UMS4 504 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TMEM5Q9Y2B1 443 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 HIF3AQ9Y2N7 669 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 RAI1Q7Z5J4 1906 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TRBV4-1A0A0J9YWV2 114 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 UBOX5O94941 541 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 GADD45GO95257 159 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SEMG1P04279 462 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 TSPAN19P0C672 248 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 PGA4P0DJD7 388 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 PGA3P0DJD8 388 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 B4GALT1P15291 398 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 PAX7P23759 505 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC9A3P48764 834 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SMIM11AP58511 58 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 CTXN1P60606 82 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 SPNS3Q6ZMD2 512 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 IGFN1Q86VF2 1251 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 DHFR2Q86XF0 187 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 ZDHHC21Q8IVQ6 265 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SYT14Q8NB59 555 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 NOXO1Q8NFA2 376 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SMAP2Q8WU79 429 aaPredicted RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 CCDC124Q96CT7 223 aaKnown RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 FAM46AQ96IP4 442 aaKnown RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC38A2Q96QD8 506 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 TNFRSF13CQ96RJ3 184 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 SEPHS2Q99611 448 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 FOXB1Q99853 325 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 KCNS3Q9BQ31 491 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 THTPAQ9BU02 230 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 C1orf21Q9H246 121 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 CXXC4Q9H2H0 198 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 MUC13Q9H3R2 512 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 KRCC1Q9NPI7 259 aaPredicted RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 TAS2R1Q9NYW7 299 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 CISD1Q9NZ45 108 aaKnown RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 STX18Q9P2W9 335 aaKnown RBP11□□□□□ -0.65
SMARCE1-218ENST00000582955 LAMP3Q9UQV4 416 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 ATP23Q9Y6H3 246 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 DSCAMO60469 2012 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 ALPK2Q86TB3 2170 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 CADP27708 2225 aa11□□□□□ -0.65
SMARCE1-218ENST00000582955 IGHV1-18A0A0C4DH31 117 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CDC42EP2O14613 210 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 TRMUO75648 421 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 STAMBPO95630 424 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 QDPRP09417 244 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CD79AP11912 226 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 ACADSP16219 412 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 RPL4P36578 427 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 MYBPC1Q00872 1141 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 RUNX1T1Q06455 604 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CD47Q08722 323 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 TRIM25Q14258 630 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 SEC23BQ15437 767 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 ANKDD1AQ495B1 522 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 IQCCQ4KMZ1 466 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 MTX3Q5HYI7 312 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 LCN8Q6JVE9 175 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 TMPRSS11FQ6ZWK6 438 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 MDP1Q86V88 176 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CCDC36Q8IYA8 594 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 OR4K5Q8NGD3 323 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 NANOS1Q8WY41 292 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 PERPQ96FX8 193 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CLPTM1LQ96KA5 538 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 DHRS1Q96LJ7 313 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF347Q96SE7 839 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 NDEL1Q9GZM8 345 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 TXNIPQ9H3M7 391 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 CXorf56Q9H5V9 222 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 IL1RAPQ9NPH3 570 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 FAIMQ9NVQ4 179 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 MOKQ9UQ07 419 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 AURKCQ9UQB9 309 aa10.99□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF503-AS2A6NEH8 195 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 NPIPB13A6NJU9 1138 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 NPIPB4C9JG80 1138 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 E7EQL1 145 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ATP6V1G2-DDX39BF2Z307 99 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 GYG2O15488 501 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 DHHO43323 396 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 HLA-HP01893 362 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 CRYAAP02489 173 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 SOD3P08294 240 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 CECR9P0C854 216 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 CBR1P16152 277 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 RRM2P31350 389 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ACVR1BP36896 505 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF84P51523 738 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 IDH3GP51553 393 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 RPL27P61353 136 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 NKX6-1P78426 367 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms