RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 SNX32Q86XE0 403 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 RIMKLAQ8IXN7 391 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 TWIST2Q8WVJ9 160 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 POP5Q969H6 163 aaKnown RBP12.52□□□□□ -0.41
IFT20-211ENST00000580991 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.41
IFT20-211ENST00000580991 MEAF6Q9HAF1 191 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 GPR160Q9UJ42 338 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 NUP50Q9UKX7 468 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 FZR1Q9UM11 496 aa12.52□□□□□ -0.41
IFT20-211ENST00000580991 FRS3O43559 492 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 SEC14L2O76054 403 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 ALX3O95076 343 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 HLA-HP01893 362 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 CD79AP11912 226 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 ACADSP16219 412 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 ZNF14P17017 642 aaPredicted RBP12.51□□□□□ -0.41
IFT20-211ENST00000580991 ZNF43P17038 809 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 CRYBB2P43320 205 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 CCL8P80075 99 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 EPS8Q12929 822 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 GNA13Q14344 377 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 PCGF3Q3KNV8 242 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 ARMCX4Q5H9R4 360 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 CLECL1Q8IZS7 167 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 TIMD4Q96H15 378 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 CLPTM1LQ96KA5 538 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 C1orf50Q9BV19 199 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 MMP27Q9H306 513 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 ZNF69Q9UC07 566 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 GIMAP2Q9UG22 337 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 WIPI2Q9Y4P8 454 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 LRRC42Q9Y546 428 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 DSPPQ9NZW4 1301 aa12.51□□□□□ -0.41
IFT20-211ENST00000580991 PPIAL4EA0A075B759 164 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PPIAL4CA0A0B4J2A2 164 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 IGHV1-69-2A0A0G2JMI3 117 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 LOC100653049A0A140TA62 436 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 AGAP5A6NIR3 686 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 C17orf100A8MU93 164 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 CLDN25C9JDP6 229 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PPIAL4DF5H284 164 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 KRT34O76011 436 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 FGF4P08620 206 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 TFPTP0C1Z6 253 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PPIAL4FP0DN26 164 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 NUDT2P50583 147 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 ATP4BP51164 291 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 SELENOVP59797 346 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 LCN2P80188 198 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PIGFQ07326 219 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 BNIP2Q12982 314 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 UGT3A2Q3SY77 523 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 IL23RQ5VWK5 629 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 TMEM154Q6P9G4 183 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 KDM8Q8N371 416 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 DNAJC9Q8WXX5 260 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 RAB1CQ92928 201 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 ZNF75AQ96N20 296 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 HINT3Q9NQE9 182 aaKnown RBP12.5□□□□□ -0.41
IFT20-211ENST00000580991 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 NKIRAS2Q9NYR9 191 aa12.5□□□□□ -0.41
IFT20-211ENST00000580991 PDP1Q9P0J1 537 aaPredicted RBP12.5□□□□□ -0.41
IFT20-211ENST00000580991 A0A096LPI6 279 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 RNASET2O00584 256 aaKnown RBP12.49□□□□□ -0.41
IFT20-211ENST00000580991 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
IFT20-211ENST00000580991 FBLN7Q53RD9 439 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 XKR7Q5GH72 579 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 C6orf136Q5SQH8 315 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 MRPL2Q5T653 305 aaKnown RBP12.49□□□□□ -0.41
IFT20-211ENST00000580991 WBP2NLQ6ICG8 309 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 PGAM4Q8N0Y7 254 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 FNDC5Q8NAU1 212 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
IFT20-211ENST00000580991 TMIGD2Q96BF3 282 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 GAL3ST1Q99999 423 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 VCX3BQ9H321 246 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 TAAR3PQ9P1P4 343 aa12.49□□□□□ -0.41
IFT20-211ENST00000580991 TESQ9UGI8 421 aaKnown RBP12.49□□□□□ -0.41
IFT20-211ENST00000580991 PRAMEF27A3QJZ7 478 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms