RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MTFR2Q6P444 385 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 CCDC71Q8IV32 467 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 LIX1LQ8IVB5 337 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 ZNF566Q969W8 418 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 APH1AQ96BI3 265 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 LRR1Q96L50 414 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 KCNK17Q96T54 332 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 MRPL13Q9BYD1 178 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 FAM118AQ9NWS6 357 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 PROCRQ9UNN8 238 aa14.07□□□□□ -0.16
CSNK1D-212ENST00000580061 LOC100130705A0A1B0GUX0 176 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 XKRYO14609 159 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 SURF4O15260 269 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC16A6O15403 523 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 IGHG1P01857 330 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 HMGN1P05114 100 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 CD8BP10966 210 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 CDKN2AP42771 156 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 HIST3H3Q16695 136 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 TSPO2Q5TGU0 170 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 CARD17Q5XLA6 110 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 TFAP2EQ6VUC0 442 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 PTCHD4Q6ZW05 846 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 ADCK1Q86TW2 530 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 ZNF100Q8IYN0 542 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 NOXO1Q8NFA2 376 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 OR4K13Q8NH42 304 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 TMEM54Q969K7 222 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 HRASLS5Q96KN8 279 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 PITX2Q99697 317 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 TEX12Q9BXU0 123 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 LINC00470Q9BZP3 86 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 SLCO5A1Q9H2Y9 848 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 CMC2Q9NRP2 79 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 COQ3Q9NZJ6 369 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 PRSS50Q9UI38 385 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 FOXD3Q9UJU5 478 aaPredicted RBP14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC5A6Q9Y289 635 aa14.06□□□□□ -0.16
CSNK1D-212ENST00000580061 DIDO1Q9BTC0 2240 aaKnown RBP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 PRSS37A4D1T9 235 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 OR6C65A6NJZ3 312 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 DVL2O14641 736 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 AHCYL1O43865 530 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 UPK3AO75631 287 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC2A10O95528 541 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 BMP5P22003 454 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 CHRNB4P30926 498 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 GGT2P36268 569 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 CSNK1A1P48729 337 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 CLRN1P58418 232 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 LGALS3BPQ08380 585 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 PHYHD1Q5SRE7 291 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 LEG1Q6P5S2 330 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 IZUMO2Q6UXV1 221 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 DHRSXQ8N5I4 330 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 ZNF610Q8N9Z0 462 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 POMGNT2Q8NAT1 580 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SYT14Q8NB59 555 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 NPEPL1Q8NDH3 523 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 ZNF555Q8NEP9 628 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SDR9C7Q8NEX9 313 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC38A2Q96QD8 506 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SNX18Q96RF0 628 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 NMNAT3Q96T66 252 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 DDOQ99489 341 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 ALG12Q9BV10 488 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 ADI1Q9BV57 179 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 PRRG3Q9BZD7 231 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 PIGMQ9H3S5 423 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC7A10Q9NS82 523 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 TVP23BQ9NYZ1 205 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 GLTPQ9NZD2 209 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 VSX1Q9NZR4 365 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 ERRFI1Q9UJM3 462 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 KLHL21Q9UJP4 597 aa14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 NDRG4Q9ULP0 352 aaKnown RBP14.05□□□□□ -0.16
CSNK1D-212ENST00000580061 SLC22A23A1A5C7 686 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 RIIAD1A6NNX1 92 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 H7C1C5 153 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 MSTNO14793 375 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.164e-6■■■■□ 24.8
CSNK1D-212ENST00000580061 CNOT4O95628 575 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 IFNGP01579 166 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 IGHV3-9P01782 118 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 ZNF3P17036 446 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 LCN6P62502 163 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 ADARB1P78563 741 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 EFNB1P98172 346 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 CD47Q08722 323 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 KEAP1Q14145 624 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 CRMP1Q14194 572 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 SNAPC1Q16533 368 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 FBXW9Q5XUX1 488 aa14.04□□□□□ -0.16
CSNK1D-212ENST00000580061 JAZF1Q86VZ6 243 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms