RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ACSF3Q4G176 576 aaPredicted RBP12.32□□□□□ -0.44
TSEN54-206ENST00000579449 KLHL12Q53G59 568 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CARD17Q5XLA6 110 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CD163Q86VB7 1156 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 MCEMP1Q8IX19 187 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SLC25A44Q96H78 314 aaPredicted RBP12.32□□□□□ -0.44
TSEN54-206ENST00000579449 ALG12Q9BV10 488 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SYT4Q9H2B2 425 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CALHM2Q9HA72 323 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 AMBNQ9NP70 447 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 PLCXD1Q9NUJ7 323 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 ASB6Q9NWX5 421 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SCN3BQ9NY72 215 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 ATRXP46100 2492 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CACNA1BQ00975 2339 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SHANK1Q9Y566 2161 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 USP24Q9UPU5 2620 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF724A8MTY0 619 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 M0R3G1 203 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 GPR171O14626 319 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 AKAP8O43823 692 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 AHCYL1O43865 530 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF432O94892 652 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 IGHG1P01857 330 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 PGA3P0DJD8 388 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 DBTP11182 482 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 FCGR2AP12318 317 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 GABRA1P14867 456 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 SPI1P17947 270 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 CRHBPP24387 322 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 HTR1FP30939 366 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 PYCR1P32322 319 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 NTF4P34130 210 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 SELENOPP49908 381 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 CLRN1P58418 232 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 CSNK2BP67870 215 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF91Q05481 1191 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 NSUN5P2Q63ZY6 315 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 RPTNQ6XPR3 784 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 AAED1Q7RTV5 226 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 TUSC5Q8IXB3 177 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 NOXO1Q8NFA2 376 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 GGHQ92820 318 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 RFKQ969G6 155 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 TMEM45BQ96B21 275 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 TSSK2Q96PF2 358 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 OR2M2Q96R28 347 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 RHNO1Q9BSD3 238 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 RCE1Q9Y256 329 aa12.31□□□□□ -0.44
TSEN54-206ENST00000579449 RPL36Q9Y3U8 105 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 PHF3Q92576 2039 aaKnown RBP12.31□□□□□ -0.44
TSEN54-206ENST00000579449 FREM1Q5H8C1 2179 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 FAM171A2A8MVW0 826 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 PTGES3LE9PB15 166 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 DCTN6O00399 190 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 WDR1O75083 606 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 YES1P07947 543 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 LYNP07948 512 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 EDN3P14138 238 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 SLC15A1P46059 708 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
TSEN54-206ENST00000579449 FMODQ06828 376 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 NFATC3Q12968 1075 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 KCTD21Q4G0X4 260 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 TMEM123Q8N131 208 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 OR6V1Q8N148 313 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 C9orf106Q8NAJ2 232 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF540Q8NDQ6 660 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 OR51L1Q8NGJ5 315 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 OR2T4Q8NH00 348 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 SGCDQ92629 289 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 WNT2BQ93097 391 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 KISS1RQ969F8 398 aaPredicted RBP12.3□□□□□ -0.44
TSEN54-206ENST00000579449 TMEM54Q969K7 222 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 RBP7Q96R05 134 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 TEAD3Q99594 435 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 NUAK2Q9H093 628 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 RERGLQ9H628 205 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms