RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 INIPQ9NRY2 104 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 MAN2C1Q9NTJ4 1040 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 SNX13Q9Y5W8 968 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 H7C1Q1 480 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 FFAR1O14842 300 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 GMNNO75496 209 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 PDE5AO76074 875 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 IGHG1P01857 330 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 HSD17B1P14061 328 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 AQP2P41181 271 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 DAP3P51398 398 aaKnown RBP12.9□□□□□ -0.34
SS18-212ENST00000579061 CHRNB3Q05901 458 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 MELKQ14680 651 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 TAF11Q15544 211 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 FXNQ16595 210 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 GLYATQ6IB77 296 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 MDP1Q86V88 176 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 PGAM4Q8N0Y7 254 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 NUP37Q8NFH4 326 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 ASB10Q8WXI3 467 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 ACOT11Q8WXI4 607 aaPredicted RBP12.9□□□□□ -0.34
SS18-212ENST00000579061 BPIFA2Q96DR5 249 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 SEPHS2Q99611 448 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 CACNG6Q9BXT2 260 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 GSX1Q9H4S2 264 aaPredicted RBP12.9□□□□□ -0.34
SS18-212ENST00000579061 DCAF13Q9NV06 445 aaKnown RBP12.9□□□□□ -0.34
SS18-212ENST00000579061 ADA2Q9NZK5 511 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
SS18-212ENST00000579061 ZNF503-AS2A6NEH8 195 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 MCIDASD6RGH6 385 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 H7C417 338 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 J3KTA2 159 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 DHHO43323 396 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 MGRN1O60291 552 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 PIP5K1CO60331 668 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 SEC14L2O76054 403 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 PRSS23O95084 383 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 F13BP05160 661 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 IFI30P13284 250 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 NCK1P16333 377 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
SS18-212ENST00000579061 CAPZA2P47755 286 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 IDH3GP51553 393 aaPredicted RBP12.89□□□□□ -0.35
SS18-212ENST00000579061 PRKCDQ05655 676 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 HIST3H3Q16695 136 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 GSG1Q2KHT4 349 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 DNM1P46Q6ZS02 220 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
SS18-212ENST00000579061 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 GORASP2Q9H8Y8 452 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 NDE1Q9NXR1 346 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 EGFL7Q9UHF1 273 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 FBXL3Q9UKT7 428 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 SAMD4AQ9UPU9 718 aaKnown RBP12.89□□□□□ -0.35
SS18-212ENST00000579061 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
SS18-212ENST00000579061 NIPBLQ6KC79 2804 aaeCLIP12.89□□□□□ -0.35
SS18-212ENST00000579061 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 VSTM5A8MXK1 200 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 UBL3O95164 117 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 IGHMP01871 453 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 CELA3BP08861 270 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 QDPRP09417 244 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 CD79AP11912 226 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 NR2C1P13056 603 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 B4GALT1P15291 398 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ACADSP16219 412 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 CALCRP30988 508 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 SLC9A3P48764 834 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ZNF133P52736 654 aaPredicted RBP12.88□□□□□ -0.35
SS18-212ENST00000579061 CLRN1P58418 232 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 SWI5Q1ZZU3 235 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 SPATS1Q496A3 300 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 SAMD4BQ5PRF9 694 aaKnown RBP12.88□□□□□ -0.35
SS18-212ENST00000579061 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 MBOAT2Q6ZWT7 520 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 DPPA2Q7Z7J5 298 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 NRMQ8IXM6 262 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
SS18-212ENST00000579061 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 MCHR2Q969V1 340 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ZNF75AQ96N20 296 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 SEC61A2Q9H9S3 476 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 CA10Q9NS85 328 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ARL8BQ9NVJ2 186 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 TMEM38BQ9NVV0 291 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 ZNF224Q9NZL3 707 aa12.88□□□□□ -0.35
SS18-212ENST00000579061 RHCGQ9UBD6 479 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms