RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 C1QTNF12Q5T7M4 302 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 KLHL17Q6TDP4 642 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 TUBA1AQ71U36 451 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 ZER1Q7Z7L7 766 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 SYT14Q8NB59 555 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 NEUROG1Q92886 237 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 MRPL13Q9BYD1 178 aaKnown RBP13.72□□□□□ -0.21
NCBP3-207ENST00000577169 OBP2BQ9NPH6 170 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 AURKCQ9UQB9 309 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
NCBP3-207ENST00000577169 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 IGHG1P01857 330 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 RAF1P04049 648 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 ZNF26P17031 533 aaPredicted RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 PTAFRP25105 342 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 CD40P25942 277 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 MAGEA2P43356 314 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 LIMS1P48059 325 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 HMGA2P52926 109 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 TOP3AQ13472 1001 aaPredicted RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 KEAP1Q14145 624 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 TAF11Q15544 211 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 HIST3H3Q16695 136 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 TMEM108Q6UXF1 575 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 AKAP1Q92667 903 aaKnown RBP eCLIP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 HDAC2Q92769 488 aaKnown RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 NINJ1Q92982 152 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 POP5Q969H6 163 aaKnown RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 GPA33Q99795 319 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 SIGLEC7Q9Y286 467 aa13.71□□□□□ -0.21
NCBP3-207ENST00000577169 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
NCBP3-207ENST00000577169 ABCA12Q86UK0 2595 aa13.71□□□□□ -0.22
NCBP3-207ENST00000577169 PDZD2O15018 2839 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 UNC119BA6NIH7 251 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 NPIPB13A6NJU9 1138 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 AQP12BA6NM10 295 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 NPIPB4C9JG80 1138 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 TNFRSF11BO00300 401 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ABCD4O14678 606 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 HS3ST1O14792 307 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 DHHO43323 396 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 OR10H3O60404 316 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 KRT36O76013 467 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ATE1O95260 518 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 CD53P19397 219 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ACVR1BP36896 505 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 RASSF2P50749 326 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ERVK-25P63136 954 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 PPP1R8Q12972 351 aaKnown RBP13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ADAM5Q6NVV9 412 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ZNF627Q7L945 461 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 AQP12AQ8IXF9 295 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 ADGRG5Q8IZF4 528 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 KBTBD8Q8NFY9 601 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 CANT1Q8WVQ1 401 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 MCHR2Q969V1 340 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 FOXB1Q99853 325 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 TRIM15Q9C019 465 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 KRCC1Q9NPI7 259 aaPredicted RBP13.7□□□□□ -0.22
NCBP3-207ENST00000577169 MGAT4BQ9UQ53 548 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 POMPQ9Y244 141 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 LYVE1Q9Y5Y7 322 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 NOTCH2Q04721 2471 aa13.7□□□□□ -0.22
NCBP3-207ENST00000577169 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
NCBP3-207ENST00000577169 CENPBD1B2RD01 187 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 SHISA9B4DS77 424 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 NDUFB2O95178 105 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 IGHMP01871 453 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 CD14P08571 375 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 RAP2AP10114 183 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 CBR1P16152 277 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 PAX7P23759 505 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
NCBP3-207ENST00000577169 CCDC36Q8IYA8 594 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 NOXO1Q8NFA2 376 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 GNPDA2Q8TDQ7 276 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
NCBP3-207ENST00000577169 TSPAN32Q96QS1 320 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 KCNK17Q96T54 332 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
NCBP3-207ENST00000577169 STX18Q9P2W9 335 aaKnown RBP13.69□□□□□ -0.22
NCBP3-207ENST00000577169 RAI1Q7Z5J4 1906 aaPredicted RBP13.68□□□□□ -0.22
NCBP3-207ENST00000577169 IGHV1-18A0A0C4DH31 117 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 B4GALT1P15291 398 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 IFNGR2P38484 337 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 CAPZA2P47755 286 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 FXYD6P3P58550 94 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 PIGFQ07326 219 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 SPOCK1Q08629 439 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 FLOT2Q14254 428 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 OR2T5Q6IEZ7 315 aa13.68□□□□□ -0.22
NCBP3-207ENST00000577169 C1orf94Q6P1W5 598 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms