RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ARFIP1P53367 373 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 BPIFB3P59826 476 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 POLR2GP62487 172 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 OLFML2AQ68BL7 652 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 BIVMQ86UB2 503 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 FOXRED2Q8IWF2 684 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 SVBPQ8N300 66 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 OR2L13Q8N349 312 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 TEX19Q8NA77 164 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 OR52E1Q8NGJ3 308 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 PLEKHA1Q9HB21 404 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 PRR13Q9NZ81 148 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 TRPM6Q9BX84 2022 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF106Q9H2Y7 1883 aaKnown RBP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 C5orf51A6NDU8 294 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 MGMTP16455 207 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 TYRP1P17643 537 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 PRSS3P35030 304 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 PSMD4P55036 377 aaKnown RBP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 EIF2B1Q14232 305 aaKnown RBP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 LY6G6FQ5SQ64 297 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 SLC35D2Q76EJ3 337 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 GTPBP8Q8N3Z3 284 aaPredicted RBP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 OR6N2Q8NGY6 317 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 NUBPLQ8TB37 319 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
SCARF1-209ENST00000576012 SPSB2Q99619 263 aa13.25□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 DCDC2BA2VCK2 349 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3BA6NDS4 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 H7C417 338 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 FKTNO75072 461 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 AKR1C4P17516 323 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 CD34P28906 385 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 EIPR1Q53HC9 387 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 GLT8D1Q68CQ7 371 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 ARHGAP11AQ6P4F7 1023 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 MOAP1Q96BY2 351 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 ELF4Q99607 663 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 MENTQ9BUN1 341 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 STARD5Q9NSY2 213 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 FRRS1LQ9P0K9 344 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 MTFP1Q9UDX5 166 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 NDRG3Q9UGV2 375 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 A0A0A6YYC8 382 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 I3L1I5 382 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 NDUFS6O75380 124 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 HLA-DQA2P01906 255 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 AKAIN1P0CW23 69 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 NID1P14543 1247 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 NR0B2Q15466 257 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 EXOSC6Q5RKV6 272 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 JMJD6Q6NYC1 403 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF619Q8N2I2 560 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 OR10G6Q8NH81 332 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 SELENOIQ9C0D9 397 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RNF208Q9H0X6 261 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 CGGBP1Q9UFW8 167 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 MDC1Q14676 2089 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 GGT3PA6NGU5 568 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 DCTN6O00399 190 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 SOX1O00570 391 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RAB40ALP0C0E4 278 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 UBBP0CG47 229 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 UBCP0CG48 685 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RPA2P15927 270 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 PBX2P40425 430 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 PTGFRP43088 359 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RAB28P51157 221 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RPS27AP62979 156 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 PM20D2Q8IYS1 436 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RAB42Q8N4Z0 105 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 RAB40AQ8WXH6 277 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 BARX1Q9HBU1 254 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-209ENST00000576012 F5P12259 2224 aa13.24□□□□□ -0.29
SCARF1-209ENST00000576012 C17orf113A0A1B0GUU1 675 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 AQP8O94778 261 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms