RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 BET1O15155 118 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 B3GALNT1O75752 331 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 KLF8O95600 359 aaPredicted RBP14.21□□□□□ -0.14
NUP88-207ENST00000573584 CA3P07451 260 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 CSF1P09603 554 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 PNMTP11086 282 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 ZNF35P13682 527 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 APEHP13798 732 aaKnown RBP14.21□□□□□ -0.14
NUP88-207ENST00000573584 ST6GAL1P15907 406 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 GPR3P46089 330 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 EFNB2P52799 333 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 BTG2P78543 158 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 YOD1Q5VVQ6 348 aaPredicted RBP14.21□□□□□ -0.14
NUP88-207ENST00000573584 B3GNTL1Q67FW5 361 aaPredicted RBP14.21□□□□□ -0.14
NUP88-207ENST00000573584 WBP2NLQ6ICG8 309 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 ANKRD16Q6P6B7 361 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 DPY19L4Q7Z388 723 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 OR10A5Q9H207 317 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 MMP25Q9NPA2 562 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 MED9Q9NWA0 146 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 TAS2R8Q9NYW2 309 aa14.21□□□□□ -0.14
NUP88-207ENST00000573584 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.14
NUP88-207ENST00000573584 TICRRQ7Z2Z1 1910 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 F5P12259 2224 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TRBV5-7A0A0A0MS05 114 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 GGT3PA6NGU5 568 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 ZNF254O75437 659 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 ZNF432O94892 652 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 FCER2P06734 321 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 RNH1P13489 461 aaKnown RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 MAT1AQ00266 395 aaKnown RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 KLHL26Q53HC5 615 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 ZNF440Q8IYI8 595 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 MUC20Q8N307 709 aaPredicted RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 SCARB1Q8WTV0 552 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 WDR76Q9H967 626 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TMEM212A6NML5 194 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 F5H5P2 479 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 GOSR2O14653 212 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 CTAG2O75638 210 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 AKR7A3O95154 331 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 GTF2F2P13984 249 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 CSRP1P21291 193 aaKnown RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 SCAND1P57086 179 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 GRM7Q14831 915 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TMEM81Q6P7N7 255 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 ATG4DQ86TL0 474 aaPredicted RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 OR2AK2Q8NG84 335 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 OR6M1Q8NGM8 313 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 OR6N1Q8NGY5 312 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TNFAIP8L1Q8WVP5 186 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 LMF1Q96S06 567 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 LPAR4Q99677 370 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 TMEM138Q9NPI0 162 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 PRTFDC1Q9NRG1 225 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 MED11Q9P086 117 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 PFDN2Q9UHV9 154 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 MRPS33Q9Y291 106 aaKnown RBP14.2□□□□□ -0.14
NUP88-207ENST00000573584 SLC6A5Q9Y345 797 aa14.2□□□□□ -0.14
NUP88-207ENST00000573584 TRAV18A0A075B6X5 111 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 FAM221BA6H8Z2 402 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 MEIS3P1A6NDR6 274 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 LPLP06858 475 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 GABRA1P14867 456 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 HPGDP15428 266 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 PPP3CBP16298 524 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 ALOX5APP20292 161 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 GUCA2AQ02747 115 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 Q6ZSR6 202 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 OR51S1Q8NGJ8 323 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 LHFPL5Q8TAF8 219 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 SLC37A2Q8TED4 501 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 ELSPBP1Q96BH3 223 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 OIP5O43482 229 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 MAOAP21397 527 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 UBE2IP63279 158 aaKnown RBP14.19□□□□□ -0.14
NUP88-207ENST00000573584 TFF2Q03403 129 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 RPL18Q07020 188 aaKnown RBP14.19□□□□□ -0.14
NUP88-207ENST00000573584 KCNAB1Q14722 419 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 CD226Q15762 336 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 OR7E24Q6IFN5 339 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 CBLN3Q6UW01 205 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 GSG1LQ6UXU4 331 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 PRSS35Q8N3Z0 413 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 ARHGEF39Q8N4T4 335 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 PHOSPHO1Q8TCT1 267 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 LIPHQ8WWY8 451 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 TCEAL2Q9H3H9 227 aaPredicted RBP14.19□□□□□ -0.14
NUP88-207ENST00000573584 FBRSQ9HAH7 460 aa14.19□□□□□ -0.14
NUP88-207ENST00000573584 CLDN4O14493 209 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 ASAH2BP0C7U1 165 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 GMFBP60983 142 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 EGR4Q05215 589 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP88-207ENST00000573584 MESTQ5EB52 335 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 ZNF542PQ5EBM4 170 aa14.18□□□□□ -0.14
NUP88-207ENST00000573584 DCAF12L2Q5VW00 463 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms