RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RIIAD1A6NNX1 92 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 CENPBD1B2RD01 187 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 H7C1C5 153 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 IMPA2O14732 288 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ARPC3O15145 178 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 IDH3BO43837 385 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 UPK3AO75631 287 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 TRMUO75648 421 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ZNF432O94892 652 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 CLDN14O95500 239 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RENP00797 406 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 PGA4P0DJD7 388 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 PGA3P0DJD8 388 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ZNF3P17036 446 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 AGAP20933 346 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 EDNRAP25101 427 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 NTF4P34130 210 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 GIPRP48546 466 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ASCL1P50553 236 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 LCN6P62502 163 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RUNX1T1Q06455 604 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 FAPQ12884 760 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 NPRL3Q12980 569 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 PTGES3Q15185 160 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 PGGHGQ32M88 737 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ZIK1Q3SY52 487 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 MESTQ5EB52 335 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 OGFRL1Q5TC84 451 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 LEG1Q6P5S2 330 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 FAM122BQ7Z309 247 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 C20orf196Q8IYI0 205 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 TMEM123Q8N131 208 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 LNX2Q8N448 690 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 NOXO1Q8NFA2 376 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 OR52E2Q8NGJ4 325 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 OR4Q3Q8NH05 313 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 LILRB4Q8NHJ6 448 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ZNF519Q8TB69 540 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 FNDC8Q8TC99 324 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 SSC4DQ8WTU2 575 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ITLN2Q8WWU7 325 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 HDAC2Q92769 488 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 OTULINQ96BN8 352 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 SLC29A1Q99808 456 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RBM24Q9BX46 236 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 GABARAPL3Q9BY60 117 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 LINC00470Q9BZP3 86 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 RERGLQ9H628 205 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 SLC7A10Q9NS82 523 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 ASB6Q9NWX5 421 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 SMPD3Q9NY59 655 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 GLTPQ9NZD2 209 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
NPLOC4-208ENST00000572351 CIB4A0PJX0 185 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 PRSS37A4D1T9 235 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 A8MXE2 369 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 BHLHE40O14503 412 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 CNOT4O95628 575 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TXNDC12O95881 172 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 CGAP01215 116 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TP53P04637 393 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 QDPRP09417 244 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 HIST1H1CP16403 213 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 PAICSP22234 425 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 GRK5P34947 590 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 CENPAP49450 140 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 ROR2Q01974 943 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 LGALS3BPQ08380 585 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 P2RY6Q15077 328 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 SNAPC1Q16533 368 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 C9orf135Q5VTT2 229 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TMEM236Q5W0B7 351 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 FBXW10Q5XX13 1052 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 DNM1P34Q6PK57 102 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 NHLRC1Q6VVB1 395 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 Q6ZT83 130 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 ZNF555Q8NEP9 628 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 SDR9C7Q8NEX9 313 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 NSMAFQ92636 917 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 LRR1Q96L50 414 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 RDH12Q96NR8 316 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 NMNAT3Q96T66 252 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 SYT4Q9H2B2 425 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TOR3AQ9H497 397 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 SLC25A19Q9HC21 320 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 CRLF2Q9HC73 371 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 ELOVL5Q9NYP7 299 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 TVP23BQ9NYZ1 205 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 MALT1Q9UDY8 824 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 KLHL21Q9UJP4 597 aa8.34□□□□□ -1.07
NPLOC4-208ENST00000572351 SMG1Q96Q15 3661 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC22A23A1A5C7 686 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 AHCYL1O43865 530 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 LYZL6O75951 148 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC2A10O95528 541 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms