RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 EMC4Q5J8M3 183 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 MUC20Q8N307 709 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-207ENST00000572253 BVESQ8NE79 360 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 OR51D1Q8NGF3 324 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 INTS14Q96SY0 518 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SHARPINQ9H0F6 387 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 PRTFDC1Q9NRG1 225 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 OR4C45A6NMZ5 311 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 A8MXK9 166 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 PRR32B1ATL7 298 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 TNFRSF10CO14798 259 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 IL32P24001 234 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 TNFRSF4P43489 277 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SORDQ00796 357 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 CCINQ13939 588 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF74Q16587 644 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 ODF4Q2M2E3 257 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 LIN54Q6MZP7 749 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 CDC20BQ86Y33 519 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 GATSQ8NAP1 163 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SIPA1Q96FS4 1042 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 KLHDC2Q9Y2U9 406 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 TRBV5-7A0A0A0MS05 114 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 D6RAR5 112 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 ATP6V1G2-DDX39BF2Z307 99 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 SPDEFO95238 335 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 UBBP0CG47 229 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 UBCP0CG48 685 aaKnown RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 S1PR1P21453 382 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 POU3F4P49335 361 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CENPAP49450 140 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 STARP49675 285 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 RPS27AP62979 156 aaKnown RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 UBA52P62987 128 aaKnown RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 GRM7Q14831 915 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 STEAP1BQ6NZ63 245 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 BCORP1Q8N888 145 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 OR8S1Q8NH09 359 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 PELOQ9BRX2 385 aaKnown RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 COMMD9Q9P000 198 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CPNE7Q9UBL6 633 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CKLFQ9UBR5 152 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 TRAV8-7A0A075B6U6 113 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 LOC100289279A0A1B0GTE1 492 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 H0Y8X5 98 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CTAG2O75638 210 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 WDPCPO95876 746 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 HLA-DQA2P01906 255 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 F13BP05160 661 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 HOXB2P14652 356 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 RPA2P15927 270 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 NAGAP17050 411 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 H2BFSP57053 126 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 TAS2R19P59542 299 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 MAT1AQ00266 395 aaKnown RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 FGL1Q08830 312 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 DNM1P46Q6ZS02 220 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 C12orf45Q8N5I9 185 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 OR5M9Q8NGP3 310 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 ARPC5LQ9BPX5 153 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 ATG5Q9H1Y0 275 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 PRODH2Q9UF12 536 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 BLACEA4D250 179 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 A6NCN8 305 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 H3BSH0 61 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 XKRYO14609 159 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 PMS2P2O95744 297 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 IGF2P01344 180 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 FGF2P09038 288 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CSF2RBP32927 897 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 LSSP48449 732 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 YOD1Q5VVQ6 348 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM205Q6UW68 189 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 NPSR1Q6W5P4 371 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 CFAP77Q6ZQR2 320 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 TAF8Q7Z7C8 310 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 OR6K3Q8NGY3 331 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 OR4C3Q8NH37 302 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 ADAMTS18Q8TE60 1221 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 DUSP19Q8WTR2 217 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 FAM3DQ96BQ1 224 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 WBP1Q96G27 269 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 SLC25A32Q9H2D1 315 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 LDAHQ9H6V9 325 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
CCDC40-207ENST00000572253 KANTRA0A1W2PQU2 76 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 C5orf67F2Z3F1 127 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 LGALS8O00214 317 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 KDM4BO94953 1096 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 OR6A2O95222 327 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 ABHD16AO95870 558 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 CD2P06729 351 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 HNRNPA2B1P22626 353 aaKnown RBP9.77□□□□□ -0.84
CCDC40-207ENST00000572253 CCKBRP32239 447 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms