RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PATE4P0C8F1 98 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 THRBP10828 461 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 IFI30P13284 250 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 PAX7P23759 505 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 PCSK6P29122 969 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 IFNA8P32881 189 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 PTDSS1P48651 473 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 CLRN1P58418 232 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 MYBPC1Q00872 1141 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 HGFACQ04756 655 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 GSG1Q2KHT4 349 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 C3orf36Q3SXR2 165 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 IFI44LQ53G44 452 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 HACD2Q6Y1H2 254 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 CBLL1Q75N03 491 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 RNF148Q8N7C7 305 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 SYT14Q8NB59 555 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 RBM15BQ8NDT2 890 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 SLC25A44Q96H78 314 aaPredicted RBP15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 ZNF347Q96SE7 839 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 FNDC11Q9BVV2 318 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 MOV10Q9HCE1 1003 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 INIPQ9NRY2 104 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 ADA2Q9NZK5 511 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 EGFL7Q9UHF1 273 aa15.43■□□□□ 0.06
CTDNEP1-207ENST00000572043 IGHV2OR16-5A0A0B4J2B6 119 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 IGHG1P01857 330 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 QDPRP09417 244 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 PGA4P0DJD7 388 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 PGA3P0DJD8 388 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 BMP4P12644 408 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 SERPINF1P36955 418 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 GIPRP48546 466 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 TOP3AQ13472 1001 aaPredicted RBP15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 LAPTM4AQ15012 233 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 ADIPOQQ15848 244 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 KRT80Q6KB66 452 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 LRFN4Q6PJG9 635 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 CCDC36Q8IYA8 594 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 ZNF525Q8N782 197 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 FAM169BQ8N8A8 192 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 GEMIN6Q8WXD5 167 aaKnown RBP15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 NANOS1Q8WY41 292 aaKnown RBP15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 RHNO1Q9BSD3 238 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 B3GNT2Q9NY97 397 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 ZNF224Q9NZL3 707 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 PMF1-BGLAPU3KQ54 211 aa15.42■□□□□ 0.06
CTDNEP1-207ENST00000572043 VPS13CQ709C8 3753 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 IGHV4-30-2A0A087WSY4 118 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 H7C417 338 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 FFAR1O14842 300 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 DHHO43323 396 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 TRMUO75648 421 aaKnown RBP15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 RAB36O95755 333 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 MAKP20794 623 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 THBS4P35443 961 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 SNRPD2P62316 118 aaKnown RBP15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 SWI5Q1ZZU3 235 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 CLEC2AQ6UVW9 174 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 IGFN1Q86VF2 1251 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 SKA3Q8IX90 412 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 NRMQ8IXM6 262 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 OFCC1Q8IZS5 231 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 FAM156AQ8NDB6 213 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 OR4F15Q8NGB8 312 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 FGFBP3Q8TAT2 258 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 ASB10Q8WXI3 467 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 BPIFA2Q96DR5 249 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 SH3GL3Q99963 347 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 VRK1Q99986 396 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 ABCD2Q9UBJ2 740 aa15.41■□□□□ 0.06
CTDNEP1-207ENST00000572043 ROS1P08922 2347 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 USF3Q68DE3 2245 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 NDUFAB1O14561 156 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 SAGP10523 405 aaPredicted RBP15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 TCN1P20061 433 aaPredicted RBP15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 PRDX6P30041 224 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 DAP3P51398 398 aaKnown RBP15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 RAB1AP62820 205 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 SNTB2Q13425 540 aaKnown RBP15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 RAB39AQ14964 217 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 TRAM2Q15035 370 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 TBPL2Q6SJ96 375 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 ZNF730Q6ZMV8 503 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 DNM1P46Q6ZS02 220 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 ZNF627Q7L945 461 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 SLC22A24Q8N4F4 322 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 ANKS4BQ8N8V4 417 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 NOXO1Q8NFA2 376 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 MCHR2Q969V1 340 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 SPAG4Q9NPE6 437 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 MAN2C1Q9NTJ4 1040 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 TMEM38BQ9NVV0 291 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 V9GYQ6 96 aa15.4■□□□□ 0.06
CTDNEP1-207ENST00000572043 TRAV27A0A087WT01 109 aa15.39■□□□□ 0.05
CTDNEP1-207ENST00000572043 INAFM1C9JVW0 142 aa15.39■□□□□ 0.05
CTDNEP1-207ENST00000572043 UBL3O95164 117 aa15.39■□□□□ 0.05
CTDNEP1-207ENST00000572043 IGF2P01344 180 aa15.39■□□□□ 0.05
CTDNEP1-207ENST00000572043 ACADSP16219 412 aa15.39■□□□□ 0.05
CTDNEP1-207ENST00000572043 ZNF14P17017 642 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms